RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 CCDC142Q17RM4 750 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 C15orf59Q2T9L4 293 aaPredicted RBP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 KCNT1Q5JUK3 1230 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 ZFYVE27Q5T4F4 411 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 SND1Q7KZF4 910 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 STRADAQ7RTN6 431 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 BNIPLQ7Z465 357 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 DDX42Q86XP3 938 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 GSPT2Q8IYD1 628 aaKnown RBP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 SCML4Q8N228 414 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 ANKLE1Q8NAG6 615 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 KCTD6Q8NC69 237 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 FAM71BQ8TC56 605 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 CLEC4CQ8WTT0 213 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 SMARCD1Q96GM5 515 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 FAM193BQ96PV7 902 aaPredicted RBP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 ZWILCHQ9H900 591 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 PNPLA8Q9NP80 782 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 CNGB3Q9NQW8 809 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 R3HDM2Q9Y2K5 976 aaKnown RBP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 NEU2Q9Y3R4 380 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 ZNF487B1APH4 448 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 HHLA1C9JL84 531 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 SYN3O14994 580 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 MDM4O15151 490 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 PRPSAP2O60256 369 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 ECEL1O95672 775 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 ALDH2P05091 517 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 FAM153BP0C7A2 387 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 CAPN2P17655 700 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 NOS2P35228 1153 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 ATN1P54259 1190 aaPredicted RBP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 HDAC4P56524 1084 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 RNASELQ05823 741 aaKnown RBP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 FAM153CQ494X1 144 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 PAN2Q504Q3 1202 aaKnown RBP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 FBXO46Q6PJ61 603 aaPredicted RBP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 BBS12Q6ZW61 710 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 CTU1Q7Z7A3 348 aaKnown RBP12.28□□□□□ -0.44
CCDC163-201ENST00000625766 LRRTM3Q86VH5 581 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 MAP7D3Q8IWC1 876 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 KRT222Q8N1A0 295 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 TTC13Q8NBP0 860 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 FAM172AQ8WUF8 416 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 ARMC5Q96C12 935 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 PEBP4Q96S96 227 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 TRIM51Q9BSJ1 452 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 FAM153AQ9UHL3 310 aa12.28□□□□□ -0.44
CCDC163-201ENST00000625766 OR1G1P47890 313 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 TKTL1P51854 596 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 TSPY1Q01534 308 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 YWHAHQ04917 246 aaPredicted RBP12.27□□□□□ -0.45
CCDC163-201ENST00000625766 ADIGQ0VDE8 80 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 MRPL58Q14197 206 aaKnown RBP12.27□□□□□ -0.45
CCDC163-201ENST00000625766 TCTN1Q2MV58 587 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 SLC25A52Q3SY17 297 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 ALS2CLQ60I27 953 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 PM20D1Q6GTS8 502 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 ABI1Q8IZP0 508 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 DNAJC5GQ8N7S2 189 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 OR10T2Q8NGX3 314 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 NKD2Q969F2 451 aaPredicted RBP12.27□□□□□ -0.45
CCDC163-201ENST00000625766 SLC2A13Q96QE2 648 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 KCNK16Q96T55 309 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 NRDE2Q9H7Z3 1164 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 KRT82Q9NSB4 513 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 ZDHHC18Q9NUE0 388 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 KLHL11Q9NVR0 708 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 HPCAL4Q9UM19 191 aa12.27□□□□□ -0.45
CCDC163-201ENST00000625766 TDRD15B5MCY1 1934 aaKnown RBP12.27□□□□□ -0.45
CCDC163-201ENST00000625766 LIASO43766 372 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 TADA2AO75478 443 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 IL4RP24394 825 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 HSPA9P38646 679 aaKnown RBP12.26□□□□□ -0.45
CCDC163-201ENST00000625766 NDUFV1P49821 464 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 ATP11AP98196 1134 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 PKN2Q16513 984 aaKnown RBP12.26□□□□□ -0.45
CCDC163-201ENST00000625766 SMTNL2Q2TAL5 461 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 ERMARDQ5T6L9 678 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 KAZNQ674X7 775 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 NPAS4Q8IUM7 802 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 PSTKQ8IV42 348 aaKnown RBP12.26□□□□□ -0.45
CCDC163-201ENST00000625766 IQCKQ8N0W5 287 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 SIX6OS1Q8N1H7 587 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 HASPINQ8TF76 798 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 ATG4AQ8WYN0 398 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 IRGQQ8WZA9 623 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 MYLPFQ96A32 169 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 SCLYQ96I15 445 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 TMEM175Q9BSA9 504 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 COLEC11Q9BWP8 271 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 ACBD3Q9H3P7 528 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 TMEM30AQ9NV96 361 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 TMLHEQ9NVH6 421 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 GRHL1Q9NZI5 618 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 DNAJB4Q9UDY4 337 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 TBX21Q9UL17 535 aa12.26□□□□□ -0.45
CCDC163-201ENST00000625766 LRFN2Q9ULH4 789 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms