RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 STK32AQ8WU08 396 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 CFAP36Q96G28 342 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 NUDCD1Q96RS6 583 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 SPATC1LQ9H0A9 340 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 PPME1Q9Y570 386 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 H0Y3Z8 333 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 ENTPD5O75356 428 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 FAM155BO75949 473 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 IL18RAPO95256 599 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 PGK2P07205 417 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 BGNP21810 368 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 ETV4P43268 484 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 NEK3P51956 506 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 CCNG1P51959 295 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 ZNF143P52747 638 aaPredicted RBP11.74□□□□□ -0.53
VARS2-213ENST00000625423 MBTD1Q05BQ5 628 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 ACAP1Q15027 740 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 SPDYAQ5MJ70 313 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 NOL9Q5SY16 702 aaKnown RBP11.74□□□□□ -0.53
VARS2-213ENST00000625423 EFCAB12Q6NXP0 572 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 CYP4V2Q6ZWL3 525 aaPredicted RBP11.74□□□□□ -0.53
VARS2-213ENST00000625423 RXFP2Q8WXD0 754 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 APOPT1Q96IL0 206 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 PPP1R16BQ96T49 567 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 MIPEPQ99797 713 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 DENND2DQ9H6A0 471 aaPredicted RBP11.74□□□□□ -0.53
VARS2-213ENST00000625423 SAR1AQ9NR31 198 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 RAB6BQ9NRW1 208 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 MAP3K6O95382 1288 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 STAG3L1P0CL83 205 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 TPBGLP0DKB5 382 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 PDGFRAP16234 1089 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 GPD1P21695 349 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 PCK1P35558 622 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 ARFIP2P53365 341 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 TAF11Q15544 211 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 FAXCQ5TGI0 409 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 MAP1SQ66K74 1059 aaPredicted RBP11.74□□□□□ -0.53
VARS2-213ENST00000625423 OR6B2Q6IFH4 312 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 DLK2Q6UY11 383 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 SH2D5Q6ZV89 423 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.74□□□□□ -0.53
VARS2-213ENST00000625423 LRRN4Q8WUT4 740 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 PRR11Q96HE9 360 aaPredicted RBP11.74□□□□□ -0.53
VARS2-213ENST00000625423 ARL8BQ9NVJ2 186 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 GPATCH2LQ9NWQ4 482 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 LNPEPQ9UIQ6 1025 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 TNFSF13BQ9Y275 285 aa11.74□□□□□ -0.53
VARS2-213ENST00000625423 SSC5DA1L4H1 1573 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 C2orf71A6NGG8 1288 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 FZD9O00144 591 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 LGR5O75473 907 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 ENDOD1O94919 500 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 HAUS5O94927 633 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 DHRS4L1P0CG22 281 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 CELF3Q5SZQ8 465 aaKnown RBP11.73□□□□□ -0.53
VARS2-213ENST00000625423 CTAGE3PQ8IX95 158 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.73□□□□□ -0.53
VARS2-213ENST00000625423 COPS5Q92905 334 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 SPATA33Q96N06 139 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 TMEM120AQ9BXJ8 343 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 KCNK13Q9HB14 408 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 USP29Q9HBJ7 922 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 FBXO6Q9NRD1 293 aaPredicted RBP11.73□□□□□ -0.53
VARS2-213ENST00000625423 DONSONQ9NYP3 566 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 C2CD4BA6NLJ0 364 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 KCNN4O15554 427 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 PRPSAP2O60256 369 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 CYP3A5P20815 502 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 SERPINB3P29508 390 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 SLC18A2Q05940 514 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 VGLL4Q14135 290 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 PRKD1Q15139 912 aaPredicted RBP11.73□□□□□ -0.53
VARS2-213ENST00000625423 WASHC2DQ5SRD0 308 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 SCYL2Q6P3W7 929 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 RFWD3Q6PCD5 774 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 FAM183BPQ6ZVS7 135 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 PLPPR4Q7Z2D5 763 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 EXOC8Q8IYI6 725 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 PPM1NQ8N819 430 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 CXorf38Q8TB03 319 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 CNPY3Q9BT09 278 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 BATF3Q9NR55 127 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 HEY1Q9Y5J3 304 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.73□□□□□ -0.53
VARS2-213ENST00000625423 E5RJQ4 531 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 USP2O75604 605 aaPredicted RBP11.73□□□□□ -0.53
VARS2-213ENST00000625423 HMGCRP04035 888 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 VDRP11473 427 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 IGBP1P78318 339 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 ZBTB16Q05516 673 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 TFDP2Q14188 446 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 KRT81Q14533 505 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 CDHR3Q6ZTQ4 885 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 CHSY1Q86X52 802 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 RNF157Q96PX1 679 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 CADM1Q9BY67 442 aaKnown RBP11.73□□□□□ -0.53
VARS2-213ENST00000625423 TLE6Q9H808 572 aa11.73□□□□□ -0.53
VARS2-213ENST00000625423 TRIM49D1C9J1S8 452 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 CHADO15335 359 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms