RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 NRLP54845 237 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 XIAPP98170 497 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 EN1Q05925 392 aaPredicted RBP14.69□□□□□ -0.06
LDB3-209ENST00000623056 PIGHQ14442 188 aaPredicted RBP14.69□□□□□ -0.06
LDB3-209ENST00000623056 SMTNL2Q2TAL5 461 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 TKFCQ3LXA3 575 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 BBS12Q6ZW61 710 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 NUDCD3Q8IVD9 361 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 SP8Q8IXZ3 490 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 FAM71DQ8N9W8 422 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 ACER1Q8TDN7 264 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 SLC13A1Q9BZW2 595 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 COL20A1Q9P218 1284 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 TEX264Q9Y6I9 313 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 LRRC37AA6NMS7 1700 aa14.69□□□□□ -0.06
LDB3-209ENST00000623056 TNS1Q9HBL0 1735 aaKnown RBP14.69□□□□□ -0.06
LDB3-209ENST00000623056 COL11A2P13942 1736 aaPredicted RBP14.68□□□□□ -0.06
LDB3-209ENST00000623056 SDR42E2A6NKP2 422 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 HNRNPRO43390 633 aaKnown RBP14.68□□□□□ -0.06
LDB3-209ENST00000623056 CCNT2O60583 730 aaKnown RBP14.68□□□□□ -0.06
LDB3-209ENST00000623056 SNNO75324 88 aaPredicted RBP14.68□□□□□ -0.06
LDB3-209ENST00000623056 PGM3O95394 542 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 CHN2P52757 468 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 NCOA4Q13772 614 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 DPYSL3Q14195 570 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 PSMD6Q15008 389 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 ANKRD20A4Q4UJ75 823 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 RALGPS1Q5JS13 557 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 SYCP2LQ5T4T6 812 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 UGT2A3Q6UWM9 527 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 LDHDQ86WU2 507 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 CTAGE3PQ8IX95 158 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 PPM1NQ8N819 430 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 TTC13Q8NBP0 860 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 ZNF606Q8WXB4 792 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 FRMD8P1Q9BZ68 369 aaPredicted RBP14.68□□□□□ -0.06
LDB3-209ENST00000623056 NDUFA13Q9P0J0 144 aa14.68□□□□□ -0.06
LDB3-209ENST00000623056 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.67□□□□□ -0.06
LDB3-209ENST00000623056 TXNDC9O14530 226 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 SORBS2O94875 1100 aaKnown RBP14.67□□□□□ -0.06
LDB3-209ENST00000623056 SNRPAP09012 282 aaKnown RBP14.67□□□□□ -0.06
LDB3-209ENST00000623056 SMIM18P0DKX4 95 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 IMPDH2P12268 514 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 NPR1P16066 1061 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 RGS2P41220 211 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 WASHC5Q12768 1159 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 ITGA9Q13797 1035 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 TRIP10Q15642 601 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 KCNT1Q5JUK3 1230 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 MAP3K21Q5TCX8 1036 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 FBXL19Q6PCT2 694 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 DGCR14Q96DF8 476 aaKnown RBP14.67□□□□□ -0.06
LDB3-209ENST00000623056 CFAP36Q96G28 342 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 NTPCRQ9BSD7 190 aaKnown RBP14.67□□□□□ -0.06
LDB3-209ENST00000623056 PTTG2Q9NZH5 202 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 ZNF219Q9P2Y4 722 aaPredicted RBP14.67□□□□□ -0.06
LDB3-209ENST00000623056 CNTN6Q9UQ52 1028 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 EFR3BQ9Y2G0 817 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 RGPD3A6NKT7 1758 aaPredicted RBP14.67□□□□□ -0.06
LDB3-209ENST00000623056 RGPD4Q7Z3J3 1758 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 AP1G1O43747 822 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 EXTL3O43909 919 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 SPAG6O75602 509 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 KRT37O76014 449 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 PDE5AO76074 875 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 TMCC1O94876 653 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 C1QAP02745 245 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 HIRAP54198 1017 aaPredicted RBP14.67□□□□□ -0.06
LDB3-209ENST00000623056 EPHB1P54762 984 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 ANGEL2Q5VTE6 544 aaKnown RBP14.67□□□□□ -0.06
LDB3-209ENST00000623056 NIPA1Q7RTP0 329 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 POLNQ7Z5Q5 900 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 SAMD3Q8N6K7 520 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 POU5F2Q8N7G0 328 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 NIPA2Q8N8Q9 360 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 PIP4K2CQ8TBX8 421 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 SYNPO2Q9UMS6 1093 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 SORCS3Q9UPU3 1222 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 TTLL3Q9Y4R7 772 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 NUB1Q9Y5A7 615 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 KAT6AQ92794 2004 aa14.67□□□□□ -0.06
LDB3-209ENST00000623056 NRXN2Q9P2S2 1712 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 C15orf38-AP3S2A0A0A6YYH1 394 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 CXorf49A8MYA2 514 aaPredicted RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 VILLO15195 856 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 AVILO75366 819 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 RFPL1O75677 317 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 STK10O94804 968 aaKnown RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 HSD17B4P51659 736 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 NLRP11P59045 1033 aaKnown RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 SLC25A11Q02978 314 aaKnown RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 DEUP1Q05D60 604 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 ARPINQ7Z6K5 226 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 FLAD1Q8NFF5 587 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 CHURC1Q8WUH1 139 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 DNAJC1Q96KC8 554 aaKnown RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 ANKEF1Q9NU02 776 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 UBIAD1Q9Y5Z9 338 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 A0A0B4J269 797 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms