RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 ANAPC1Q9H1A4 1944 aa13.03□□□□□ -0.32
CBWD3-218ENST00000622755 MYO16Q9Y6X6 1858 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 ARNTLO00327 626 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 VDRP11473 427 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 BMP6P22004 513 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 CCR3P51677 355 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 CACNA2D1P54289 1103 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 BCAT1P54687 386 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 STILQ15468 1287 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 ZNF77Q15935 545 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 CT47A1Q5JQC4 288 aaPredicted RBP13.02□□□□□ -0.33
CBWD3-218ENST00000622755 PPP1R26Q5T8A7 1209 aaPredicted RBP13.02□□□□□ -0.33
CBWD3-218ENST00000622755 CLEC20AQ6ZU45 233 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 PAQR9Q6ZVX9 377 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 TRIM59Q8IWR1 403 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 SYNPOQ8N3V7 929 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 TTC8Q8TAM2 541 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 TATDN2Q93075 761 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 CLDN23Q96B33 292 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 CNOT6LQ96LI5 555 aaKnown RBP13.02□□□□□ -0.33
CBWD3-218ENST00000622755 TWNKQ96RR1 684 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 SMOQ99835 787 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 FAM83CQ9BQN1 747 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 SEMA4AQ9H3S1 761 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 CHORDC1Q9UHD1 332 aaPredicted RBP13.02□□□□□ -0.33
CBWD3-218ENST00000622755 LSM7Q9UK45 103 aaKnown RBP13.02□□□□□ -0.33
CBWD3-218ENST00000622755 FBXO4Q9UKT5 387 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 PCDHB4Q9Y5E5 795 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 CPQQ9Y646 472 aa13.02□□□□□ -0.33
CBWD3-218ENST00000622755 ZDBF2Q9HCK1 2354 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 LEFTY2O00292 366 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 TNFRSF10BO14763 440 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 TLR5O60602 858 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 MBD3O95983 291 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 OAS1P00973 400 aaKnown RBP13.01□□□□□ -0.33
CBWD3-218ENST00000622755 PAEPP09466 180 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 ATP5C1P36542 298 aaKnown RBP13.01□□□□□ -0.33
CBWD3-218ENST00000622755 RAD23BP54727 409 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 NRLP54845 237 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 TNK2Q07912 1038 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 PREPLQ4J6C6 727 aaPredicted RBP13.01□□□□□ -0.33
CBWD3-218ENST00000622755 ARHGAP17Q68EM7 881 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 TMEM270Q6UE05 265 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 ENOSF1Q7L5Y1 443 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 SCAMP5Q8TAC9 235 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 ECT2Q9H8V3 914 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 SMPD4Q9NXE4 827 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 GMIPQ9P107 970 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 SCML2Q9UQR0 700 aa13.01□□□□□ -0.33
CBWD3-218ENST00000622755 PATJQ8NI35 1801 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 E2F8A0AVK6 867 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 PES1O00541 588 aaKnown RBP13□□□□□ -0.33
CBWD3-218ENST00000622755 ATG13O75143 517 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 ADH1CP00326 375 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 DRD1P21728 446 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 ERCC5P28715 1186 aaPredicted RBP13□□□□□ -0.33
CBWD3-218ENST00000622755 SOX9P48436 509 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 MFAP3P55082 362 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 GCNT1Q02742 428 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 BST2Q10589 180 aaKnown RBP13□□□□□ -0.33
CBWD3-218ENST00000622755 PON2Q15165 354 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 ZNF528Q3MIS6 628 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 FBXO43Q4G163 708 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 SNX30Q5VWJ9 437 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 TRIM68Q6AZZ1 485 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 SASS6Q6UVJ0 657 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 GBP6Q6ZN66 633 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 NUDT18Q6ZVK8 323 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 ANKRD52Q8NB46 1076 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 SLC4A11Q8NBS3 891 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 EHBP1Q8NDI1 1231 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 WHAMMQ8TF30 809 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 GOLGA1Q92805 767 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 NKD2Q969F2 451 aaPredicted RBP13□□□□□ -0.33
CBWD3-218ENST00000622755 OTUB2Q96DC9 234 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 LRRC3BQ96PB8 259 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 SLC22A12Q96S37 553 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 ARID3AQ99856 593 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 FAM126AQ9BYI3 521 aaPredicted RBP13□□□□□ -0.33
CBWD3-218ENST00000622755 UBXN6Q9BZV1 441 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 CHRDQ9H2X0 955 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 THAP9Q9H5L6 903 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 TMEM30AQ9NV96 361 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 FAM86C1Q9NVL1 165 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 IL37Q9NZH6 218 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 DLGAP2Q9P1A6 1054 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 CFAP97Q9P2B7 532 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 NAGPAQ9UK23 515 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 MTF2Q9Y483 593 aaPredicted RBP13□□□□□ -0.33
CBWD3-218ENST00000622755 WNT6Q9Y6F9 365 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 TRIOO75962 3097 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 KIF26AQ9ULI4 1882 aaPredicted RBP13□□□□□ -0.33
CBWD3-218ENST00000622755 COL4A2P08572 1712 aa13□□□□□ -0.33
CBWD3-218ENST00000622755 FAM92AA1XBS5 289 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 COCHO43405 550 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 MED7O43513 233 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 LRRN2O75325 713 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 BEST1O76090 585 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 OLFM2O95897 454 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms