RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 RARBP10826 455 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 ZNF132P52740 706 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 CAPSQ13938 189 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 SGSM1Q2NKQ1 1148 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 SLFN12LQ6IEE8 588 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 BBS12Q6ZW61 710 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 NSUN6Q8TEA1 469 aaKnown RBP16.43■□□□□ 0.22
NPHP4-211ENST00000622020 NIF3L1Q9GZT8 377 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 PORCNQ9H237 461 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 VCXQ9H320 206 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 ARHGEF4Q9NR80 690 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 PRR5-ARHGAP8B1AHC4 643 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 I3L4J1 428 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 GMPRP36959 345 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 MCCD1P59942 119 aaPredicted RBP16.43■□□□□ 0.22
NPHP4-211ENST00000622020 ARHGAP8P85298 464 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 IZUMO2Q6UXV1 221 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 SMC1BQ8NDV3 1235 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 SH3TC2Q8TF17 1288 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 SLC44A1Q8WWI5 657 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 PRPF31Q8WWY3 499 aaKnown RBP16.43■□□□□ 0.22
NPHP4-211ENST00000622020 PIWIL1Q96J94 861 aaKnown RBP16.43■□□□□ 0.22
NPHP4-211ENST00000622020 USP18Q9UMW8 372 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 LOXHD1Q8IVV2 1947 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-211ENST00000622020 ARHGAP42A6NI28 874 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 KRT7P08729 469 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 HMGCS2P54868 508 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 ROR1Q01973 937 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 CNTN2Q02246 1040 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 FAM102AQ5T9C2 384 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-211ENST00000622020 C1orf146Q5VVC0 180 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 C16orf46Q6P387 395 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 TRMT10BQ6PF06 316 aaKnown RBP16.42■□□□□ 0.22
NPHP4-211ENST00000622020 RIPOR1Q6ZS17 1223 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 TMEM192Q8IY95 271 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 UNC5BQ8IZJ1 945 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-211ENST00000622020 CCDC124Q96CT7 223 aaKnown RBP16.42■□□□□ 0.22
NPHP4-211ENST00000622020 GPRASP2Q96D09 838 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 APOL6Q9BWW8 343 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 ZC3H7BQ9UGR2 993 aaKnown RBP16.42■□□□□ 0.22
NPHP4-211ENST00000622020 LYPLA1O75608 230 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-211ENST00000622020 TOM1L1O75674 476 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 RNF8O76064 485 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 LDHAP00338 332 aaKnown RBP16.42■□□□□ 0.22
NPHP4-211ENST00000622020 SUPT20HL2P0C7V6 817 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 SUPT20HL1Q3ZLR7 823 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 OR52E8Q6IFG1 317 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 NUDCD3Q8IVD9 361 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 CCDC110Q8TBZ0 833 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 ZNF398Q8TD17 642 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 ALKBH8Q96BT7 664 aaKnown RBP16.42■□□□□ 0.22
NPHP4-211ENST00000622020 TWNKQ96RR1 684 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 PEBP4Q96S96 227 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 SMYD2Q9NRG4 433 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 STRIP2Q9ULQ0 834 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 CNTN6Q9UQ52 1028 aa16.42■□□□□ 0.22
NPHP4-211ENST00000622020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-211ENST00000622020 OATP04181 439 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 SLC25A3Q00325 362 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 PEX6Q13608 980 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 JDP2Q8WYK2 163 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 LPAR1Q92633 364 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 E2F7Q96AV8 911 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 ANKRD27Q96NW4 1050 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 PANX3Q96QZ0 392 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 A0A1B0GVG6 124 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 PLSCR1O15162 318 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 F7P08709 466 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-211ENST00000622020 NAMPTP43490 491 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 EPHB1P54762 984 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 PRKG1Q13976 671 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 DUOXA2Q1HG44 320 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 STYK1Q6J9G0 422 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 IRGCQ6NXR0 463 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 TRIM50Q86XT4 487 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 SCUBE1Q8IWY4 988 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 NDUFAF2Q8N183 169 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 GSTCDQ8NEC7 633 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 PPP1R14CQ8TAE6 165 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 PYDC1Q8WXC3 89 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 MAGEB5Q9BZ81 275 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 CYP4F11Q9HBI6 524 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 STX18Q9P2W9 335 aaKnown RBP16.41■□□□□ 0.22
NPHP4-211ENST00000622020 STYXL1Q9Y6J8 313 aa16.41■□□□□ 0.22
NPHP4-211ENST00000622020 E7ESA3 106 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 RBL1P28749 1068 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 GRIA1P42261 906 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 CRADDP78560 199 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 MRPS5P82675 430 aaKnown RBP16.4■□□□□ 0.22
NPHP4-211ENST00000622020 PPP6R3Q5H9R7 873 aaPredicted RBP16.4■□□□□ 0.22
NPHP4-211ENST00000622020 BSPRYQ5W0U4 402 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 RNF149Q8NC42 400 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 GMLQ99445 158 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 ZNF184Q99676 751 aaPredicted RBP16.4■□□□□ 0.22
NPHP4-211ENST00000622020 SSU72Q9NP77 194 aaKnown RBP16.4■□□□□ 0.22
NPHP4-211ENST00000622020 TRPC5Q9UL62 973 aaPredicted RBP16.4■□□□□ 0.22
NPHP4-211ENST00000622020 PPM1HQ9ULR3 514 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 TEX264Q9Y6I9 313 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms