RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 KRT4P19013 534 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 TGM2P21980 687 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 MNAT1P51948 309 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 YARSP54577 528 aaKnown RBP9.84□□□□□ -0.83
PDPN-212ENST00000621990 CDH6P55285 790 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 SF3A3Q12874 501 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDPN-212ENST00000621990 MMRN1Q13201 1228 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 TTLL12Q14166 644 aaPredicted RBP9.84□□□□□ -0.83
PDPN-212ENST00000621990 EFTUD2Q15029 972 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDPN-212ENST00000621990 SLC1A5Q15758 541 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 GOLGA7BQ2TAP0 167 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 RAB6CQ53S08 254 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 BOLA3Q53S33 107 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 SLC9A4Q6AI14 798 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 C4orf33Q8N1A6 199 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 ZNF276Q8N554 614 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 PLD5Q8N7P1 536 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 FBF1Q8TES7 1133 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 SLC35F5Q8WV83 523 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 ALKBH8Q96BT7 664 aaKnown RBP9.84□□□□□ -0.83
PDPN-212ENST00000621990 KIF12Q96FN5 646 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 RAB6CQ9H0N0 254 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 ARHGEF3Q9NR81 526 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.84□□□□□ -0.83
PDPN-212ENST00000621990 RNF181Q9P0P0 153 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 STRNO43815 780 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 EDF1O60869 148 aaKnown RBP9.84□□□□□ -0.83
PDPN-212ENST00000621990 SPAG6O75602 509 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 FAM155BO75949 473 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 SNAI1O95863 264 aaPredicted RBP9.84□□□□□ -0.83
PDPN-212ENST00000621990 HOXA11P31270 313 aaPredicted RBP9.84□□□□□ -0.83
PDPN-212ENST00000621990 ADCYAP1R1P41586 468 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 GRIK4Q16099 956 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 C15orf59Q2T9L4 293 aaPredicted RBP9.84□□□□□ -0.83
PDPN-212ENST00000621990 PMF1Q6P1K2 205 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 CAPN12Q6ZSI9 719 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 ARCQ7LC44 396 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 TTC30AQ86WT1 665 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 ZDHHC17Q8IUH5 632 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 MAP7D3Q8IWC1 876 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 PQLC3Q8N755 202 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 LRRC52Q8N7C0 313 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 C12orf29Q8N999 325 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 BANPQ8N9N5 519 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 PPP1R16BQ96T49 567 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 NCAPGQ9BPX3 1015 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 C11orf84Q9BUA3 381 aaPredicted RBP9.84□□□□□ -0.83
PDPN-212ENST00000621990 FRMD8Q9BZ67 464 aaPredicted RBP9.84□□□□□ -0.83
PDPN-212ENST00000621990 ADAMTS10Q9H324 1103 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 ECT2Q9H8V3 914 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 PNPLA8Q9NP80 782 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 CYLDQ9NQC7 956 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 GTF2IRD1Q9UHL9 959 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 PHTF1Q9UMS5 762 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 BCLAF3A2AJT9 711 aaKnown RBP9.84□□□□□ -0.84
PDPN-212ENST00000621990 CFAP69A5D8W1 941 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 UNCXA6NJT0 531 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 TM9SF1O15321 606 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 C1QAP02745 245 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 ALADP13716 330 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 NQO1P15559 274 aaKnown RBP9.84□□□□□ -0.84
PDPN-212ENST00000621990 CA4P22748 312 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 RPL34P49207 117 aaKnown RBP9.84□□□□□ -0.84
PDPN-212ENST00000621990 SLC6A3Q01959 620 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 DNAJC3Q13217 504 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 SPDYAQ5MJ70 313 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 PPP1R26Q5T8A7 1209 aaPredicted RBP9.84□□□□□ -0.84
PDPN-212ENST00000621990 ARHGAP17Q68EM7 881 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 OR6B2Q6IFH4 312 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 NPNTQ6UXI9 565 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 ALKAL1Q6UXT8 129 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 SESTD1Q86VW0 696 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 UNC93AQ86WB7 457 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 IGDCC3Q8IVU1 814 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 SNX27Q96L92 541 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 CYTH2Q99418 400 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 ZNF670Q9BS34 389 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 PAK5Q9P286 719 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 MORF4L1Q9UBU8 362 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 NME7Q9Y5B8 376 aa9.84□□□□□ -0.84
PDPN-212ENST00000621990 KAT6AQ92794 2004 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 CAPN15O75808 1086 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 GABBR2O75899 941 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 ATP6V1G2O95670 118 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 MMP3P08254 477 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 FGFR1P11362 822 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 ATP2A2P16615 1042 aaKnown RBP9.83□□□□□ -0.84
PDPN-212ENST00000621990 SCNN1AP37088 669 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 BASP1P80723 227 aaKnown RBP9.83□□□□□ -0.84
PDPN-212ENST00000621990 PCBP1Q15365 356 aaKnown RBP eCLIP9.83□□□□□ -0.84
PDPN-212ENST00000621990 DUSP28Q4G0W2 176 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 WLSQ5T9L3 541 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 DARS2Q6PI48 645 aaKnown RBP9.83□□□□□ -0.84
PDPN-212ENST00000621990 SH2D5Q6ZV89 423 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 PALM2Q8IXS6 379 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 AGGF1Q8N302 714 aaeCLIP9.83□□□□□ -0.84
PDPN-212ENST00000621990 SPOCK2Q92563 424 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 CENPIQ92674 756 aaPredicted RBP9.83□□□□□ -0.84
PDPN-212ENST00000621990 ZMAT2Q96NC0 199 aaKnown RBP9.83□□□□□ -0.84
PDPN-212ENST00000621990 MRPL45Q9BRJ2 306 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms