RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 SPECC1Q5M775 1068 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 SPATA1Q5VX52 437 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 MSANTD2Q6P1R3 559 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 NFRKBQ6P4R8 1299 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 SYNE3Q6ZMZ3 975 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 BBS12Q6ZW61 710 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 NEK10Q6ZWH5 1172 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 TMPRSS9Q7Z410 1059 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 ANKS1BQ7Z6G8 1248 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 GALNT5Q7Z7M9 940 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 CARFQ8N187 725 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 MB21D1Q8N884 522 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 TDRD7Q8NHU6 1098 aaKnown RBP4.32□□□□□ -1.72
LRRC39-204ENST00000620882 BORCS6Q96GS4 357 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 WDR24Q96S15 920 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 CPPED1Q9BRF8 314 aaPredicted RBP4.32□□□□□ -1.72
LRRC39-204ENST00000620882 REEP2Q9BRK0 252 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 TEX101Q9BY14 249 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 BRD8Q9H0E9 1235 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 PRDM13Q9H4Q3 707 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 HELLSQ9NRZ9 838 aa4.32□□□□□ -1.72
LRRC39-204ENST00000620882 ORC3Q9UBD5 711 aaPredicted RBP4.32□□□□□ -1.72
LRRC39-204ENST00000620882 A0A087X0M5 115 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 PNMA6EA0A0J9YXQ4 647 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 A0A1B0GX30 115 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 SH3D21A4FU49 640 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 VWA3AA6NCI4 1184 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 K7ENM7 598 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 RGS10O43665 173 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 DDX58O95786 925 aaKnown RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 PDHA1P08559 390 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 CSF1P09603 554 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 GGT5P36269 586 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 KCNC1P48547 511 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 PRKAG1P54619 331 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 LRP8Q14114 963 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 PDE1CQ14123 709 aaPredicted RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 LY6KQ17RY6 165 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 MGAT5BQ3V5L5 792 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 C1QL3Q5VWW1 255 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 ACAD10Q6JQN1 1059 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 FAM111BQ6SJ93 734 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 DSTYKQ6XUX3 929 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 PIK3AP1Q6ZUJ8 805 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 DOK3Q7L591 496 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 RAB11FIP2Q7L804 512 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 KRT77Q7Z794 578 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 KRT73Q86Y46 540 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 AOPEPQ8N6M6 819 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 METTL25Q8N6Q8 603 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 LINS1Q8NG48 757 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 OR52N2Q8NGI0 321 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 STAMQ92783 540 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 RSRC1Q96IZ7 334 aaKnown RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 TRIM5Q9C035 493 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 RETREG1Q9H6L5 497 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 JMJD4Q9H9V9 463 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 CD248Q9HCU0 757 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 TLR8Q9NR97 1041 aaKnown RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 POGKQ9P215 609 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 DNAJB11Q9UBS4 358 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 NDRG4Q9ULP0 352 aaKnown RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 GPR34Q9UPC5 381 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 SSX2IPQ9Y2D8 614 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 SNX14Q9Y5W7 946 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 AQP7P3A6NL99 342 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 M0QZQ0 153 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 ZNF185O15231 689 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 CD3EAPO15446 510 aaKnown RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 CDC14BO60729 498 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 HEXIM1O94992 359 aaKnown RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 KRT1P04264 644 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 ALADP13716 330 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 SERPINA4P29622 427 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 NEXNQ0ZGT2 675 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 ERV3-1Q14264 604 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 RPS6KA2Q15349 733 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 ATPAF1Q5TC12 328 aaPredicted RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 RGS7BPQ6MZT1 257 aaPredicted RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 EFCAB12Q6NXP0 572 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 H1FNTQ75WM6 255 aaPredicted RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 NBPF11Q86T75 865 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 NRSN1Q8IZ57 195 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 C11orf44Q8N8P7 122 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 POC1BQ8TC44 478 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 RFFLQ8WZ73 363 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 RNF125Q96EQ8 232 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 PHF7Q9BWX1 381 aaPredicted RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 C12orf65Q9H3J6 166 aaKnown RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 FAM83DQ9H4H8 585 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 PLEKHA2Q9HB19 425 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 ZDHHC7Q9NXF8 308 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 CA14Q9ULX7 337 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 OAZ3Q9UMX2 235 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 C19orf53Q9UNZ5 99 aaPredicted RBP4.31□□□□□ -1.72
LRRC39-204ENST00000620882 PCDHB7Q9Y5E2 793 aa4.31□□□□□ -1.72
LRRC39-204ENST00000620882 CNPP09543 421 aaKnown RBP4.3□□□□□ -1.72
LRRC39-204ENST00000620882 ATXN1LP0C7T5 689 aaKnown RBP4.3□□□□□ -1.72
LRRC39-204ENST00000620882 CYP2C9P11712 490 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 CPA1P15085 419 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms