RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 NEU1Q99519 415 aa5.06□□□□□ -1.6
SEM1-220ENST00000619259 TRIM54Q9BYV2 358 aa5.06□□□□□ -1.6
SEM1-220ENST00000619259 TINAGL1Q9GZM7 467 aaPredicted RBP5.06□□□□□ -1.6
SEM1-220ENST00000619259 RNPEPQ9H4A4 650 aa5.06□□□□□ -1.6
SEM1-220ENST00000619259 GPR35Q9HC97 309 aa5.06□□□□□ -1.6
SEM1-220ENST00000619259 DIAPH3Q9NSV4 1193 aa5.06□□□□□ -1.6
SEM1-220ENST00000619259 DBNLQ9UJU6 430 aaKnown RBP5.06□□□□□ -1.6
SEM1-220ENST00000619259 PHTF1Q9UMS5 762 aa5.06□□□□□ -1.6
SEM1-220ENST00000619259 AGAP1Q9UPQ3 857 aa5.06□□□□□ -1.6
SEM1-220ENST00000619259 SNX14Q9Y5W7 946 aa5.06□□□□□ -1.6
SEM1-220ENST00000619259 FPGT-TNNI3KV9GXZ4 949 aa5.06□□□□□ -1.6
SEM1-220ENST00000619259 ITGB4P16144 1822 aa5.06□□□□□ -1.6
SEM1-220ENST00000619259 ZNF609O15014 1411 aa5.06□□□□□ -1.6
SEM1-220ENST00000619259 PALLDQ8WX93 1383 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 SPATA31A1Q5TZJ5 1347 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 MAP3K15Q6ZN16 1313 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 SH3TC1Q8TE82 1336 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 A0A1B0GTW7 788 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 DIRC3C9JPN6 131 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 MYO1FO00160 1098 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 EYA2O00167 538 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 BAG4O95429 457 aaKnown RBP5.05□□□□□ -1.6
SEM1-220ENST00000619259 CHEK2O96017 543 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 THP07101 528 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 HSP90AA1P07900 732 aaKnown RBP5.05□□□□□ -1.6
SEM1-220ENST00000619259 CYP19A1P11511 503 aaPredicted RBP5.05□□□□□ -1.6
SEM1-220ENST00000619259 SLC5A1P13866 664 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 EN2P19622 333 aaPredicted RBP5.05□□□□□ -1.6
SEM1-220ENST00000619259 IL6STP40189 918 aaPredicted RBP5.05□□□□□ -1.6
SEM1-220ENST00000619259 AK2P54819 239 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 RAB32Q13637 225 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 KLHL40Q2TBA0 621 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 NRN1LQ496H8 165 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 USP39Q53GS9 565 aaKnown RBP5.05□□□□□ -1.6
SEM1-220ENST00000619259 RABL3Q5HYI8 236 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 C3orf38Q5JPI3 329 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 VPS53Q5VIR6 699 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 AGAP9Q5VTM2 703 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 SRLQ86TD4 932 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 MAPKAPK5Q8IW41 473 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 CFAP52Q8N1V2 620 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 TTC9BQ8N6N2 239 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 ACRBPQ8NEB7 543 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 KBTBD7Q8WVZ9 684 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 EXTL1Q92935 676 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 TRIB1Q96RU8 372 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 ELAC2Q9BQ52 826 aaKnown RBP5.05□□□□□ -1.6
SEM1-220ENST00000619259 CNPPD1Q9BV87 410 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 TEX101Q9BY14 249 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 KLHL11Q9NVR0 708 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 RNF181Q9P0P0 153 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 HMG20BQ9P0W2 317 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 AFF4Q9UHB7 1163 aaKnown RBP5.05□□□□□ -1.6
SEM1-220ENST00000619259 RAPGEFL1Q9UHV5 662 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 CNOT11Q9UKZ1 510 aaKnown RBP5.05□□□□□ -1.6
SEM1-220ENST00000619259 MED16Q9Y2X0 877 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 TMX2Q9Y320 296 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 PLEKHM1Q9Y4G2 1056 aa5.05□□□□□ -1.6
SEM1-220ENST00000619259 SPATA31A5Q5VU36 1347 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 SPATA31A7Q8IWB4 1347 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 E9PLN8 166 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 EXOC5O00471 708 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 TOR1BO14657 336 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 TRIM24O15164 1050 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 ABHD16AO95870 558 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 RPL17P18621 184 aaKnown RBP5.04□□□□□ -1.6
SEM1-220ENST00000619259 CHRM3P20309 590 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 FGFR4P22455 802 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 MAGEA10P43363 369 aaPredicted RBP5.04□□□□□ -1.6
SEM1-220ENST00000619259 PRIM2P49643 509 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 UCP3P55916 312 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 POU6F2P78424 691 aaPredicted RBP5.04□□□□□ -1.6
SEM1-220ENST00000619259 CTBP1Q13363 440 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 SPDYE7PQ495Y7 208 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 PREPLQ4J6C6 727 aaPredicted RBP5.04□□□□□ -1.6
SEM1-220ENST00000619259 L1TD1Q5T7N2 865 aaKnown RBP5.04□□□□□ -1.6
SEM1-220ENST00000619259 METRNLQ641Q3 311 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 CWC27Q6UX04 472 aaKnown RBP5.04□□□□□ -1.6
SEM1-220ENST00000619259 KIF6Q6ZMV9 814 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 HTR3DQ70Z44 454 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 SESTD1Q86VW0 696 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 TMPRSS6Q8IU80 811 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 LIX1LQ8IVB5 337 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 DNAJC10Q8IXB1 793 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 KRT78Q8N1N4 520 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 CCDC33Q8N5R6 958 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 DNAJC5GQ8N7S2 189 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 KBTBD3Q8NAB2 608 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 FBXO41Q8TF61 875 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 DVL3Q92997 716 aaPredicted RBP5.04□□□□□ -1.6
SEM1-220ENST00000619259 RNF31Q96EP0 1072 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 CCDC138Q96M89 665 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 RPS6KC1Q96S38 1066 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 VKORC1Q9BQB6 163 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 TTYH3Q9C0H2 523 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 BTBD1Q9H0C5 482 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 PNPLA8Q9NP80 782 aa5.04□□□□□ -1.6
SEM1-220ENST00000619259 PARPBPQ9NWS1 579 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms