RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 TCP11Q8WWU5 503 aa8.23□□□□□ -1.09
CBWD1-228ENST00000619157 MRPL38Q96DV4 380 aaKnown RBP8.23□□□□□ -1.09
CBWD1-228ENST00000619157 PLIN2Q99541 437 aa8.23□□□□□ -1.09
CBWD1-228ENST00000619157 SYT3Q9BQG1 590 aa8.23□□□□□ -1.09
CBWD1-228ENST00000619157 KIFC3Q9BVG8 833 aa8.23□□□□□ -1.09
CBWD1-228ENST00000619157 NFKBIZQ9BYH8 718 aa8.23□□□□□ -1.09
CBWD1-228ENST00000619157 TMEM117Q9H0C3 514 aa8.23□□□□□ -1.09
CBWD1-228ENST00000619157 CCDC113Q9H0I3 377 aa8.23□□□□□ -1.09
CBWD1-228ENST00000619157 CXCL16Q9H2A7 254 aa8.23□□□□□ -1.09
CBWD1-228ENST00000619157 ST6GALNAC2Q9UJ37 374 aa8.23□□□□□ -1.09
CBWD1-228ENST00000619157 PLXNA4Q9HCM2 1894 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 ARHGEF35A5YM69 484 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 C1QTNF3-AMACRE9PGA6 284 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 INO80B-WBP1J3KQ70 363 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 OFD1O75665 1012 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 EYA4O95677 639 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 C6P13671 934 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 KCNQ1P51787 676 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 MXD4Q14582 209 aaPredicted RBP8.22□□□□□ -1.09
CBWD1-228ENST00000619157 PPP2R5DQ14738 602 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 TCEAL5Q5H9L2 206 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 EEF1DP3Q658K8 133 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 ARL6IP4Q66PJ3 421 aaKnown RBP8.22□□□□□ -1.09
CBWD1-228ENST00000619157 TWF2Q6IBS0 349 aaKnown RBP8.22□□□□□ -1.09
CBWD1-228ENST00000619157 RINT1Q6NUQ1 792 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 C1orf186Q6ZWK4 172 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 ADGRD2Q7Z7M1 963 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 SLITRK4Q8IW52 837 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 EXOC8Q8IYI6 725 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 MCPH1Q8NEM0 835 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 ERMNQ8TAM6 284 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 POF1BQ8WVV4 589 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 P2RX5Q93086 422 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 SORCS2Q96PQ0 1159 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 USP28Q96RU2 1077 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 INO80BQ9C086 356 aaPredicted RBP8.22□□□□□ -1.09
CBWD1-228ENST00000619157 FZD8Q9H461 694 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 BLOC1S4Q9NUP1 217 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 MIOSQ9NXC5 875 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 THEGQ9P2T0 379 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 FBXO2Q9UK22 296 aaPredicted RBP8.22□□□□□ -1.09
CBWD1-228ENST00000619157 SF3B6Q9Y3B4 125 aaKnown RBP8.22□□□□□ -1.09
CBWD1-228ENST00000619157 HES2Q9Y543 173 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 PCDHB2Q9Y5E7 798 aa8.22□□□□□ -1.09
CBWD1-228ENST00000619157 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.21□□□□□ -1.1
CBWD1-228ENST00000619157 NPHP3-ACAD11A0A0J9YXS1 232 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 A0A1B0GUA9 196 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 LRRIQ4A6NIV6 560 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 NT5C1B-RDH14C9J2C7 533 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 OVOL3O00110 214 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 LINC01565O15544 149 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 STX6O43752 255 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 FGF18O76093 207 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 DDHD2O94830 711 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 CD247P20963 164 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 MARCKSP29966 332 aaPredicted RBP8.21□□□□□ -1.1
CBWD1-228ENST00000619157 LTBRP36941 435 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 NAMPTP43490 491 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 SLC12A3P55017 1021 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 RBM10P98175 930 aaKnown RBP8.21□□□□□ -1.1
CBWD1-228ENST00000619157 HYAL1Q12794 435 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 SPECC1Q5M775 1068 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 KRT79Q5XKE5 535 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 KCNT2Q6UVM3 1135 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 HS2ST1Q7LGA3 356 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 ZNF280BQ86YH2 543 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 LRRC43Q8N309 656 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 LZTR1Q8N653 840 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 GSTCDQ8NEC7 633 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 CLIC6Q96NY7 704 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 C11orf84Q9BUA3 381 aaPredicted RBP8.21□□□□□ -1.1
CBWD1-228ENST00000619157 VN1R3Q9BXE9 311 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 CSRNP2Q9H175 543 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 NXF3Q9H4D5 531 aaKnown RBP8.21□□□□□ -1.1
CBWD1-228ENST00000619157 NRDE2Q9H7Z3 1164 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 TBC1D13Q9NVG8 400 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 DACT1Q9NYF0 836 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 DNAJB4Q9UDY4 337 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 IPPQ9Y573 584 aa8.21□□□□□ -1.1
CBWD1-228ENST00000619157 A0A087X0B3 334 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 F8W810 466 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 INPPL1O15357 1258 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 MEFVO15553 781 aaPredicted RBP8.2□□□□□ -1.1
CBWD1-228ENST00000619157 HIP1RO75146 1068 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 NCLP19338 710 aaKnown RBP8.2□□□□□ -1.1
CBWD1-228ENST00000619157 PDCP20941 246 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 RAB27AP51159 221 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 POU4F1Q01851 419 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 CEBPZQ03701 1054 aaKnown RBP8.2□□□□□ -1.1
CBWD1-228ENST00000619157 TFDP1Q14186 410 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 KARSQ15046 597 aaKnown RBP8.2□□□□□ -1.1
CBWD1-228ENST00000619157 ZRSR1Q15695 479 aaKnown RBP8.2□□□□□ -1.1
CBWD1-228ENST00000619157 FAM187BQ17R55 369 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 NAALADL2Q58DX5 795 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 NOMO2Q5JPE7 1267 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 SPRED1Q7Z699 444 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 SLC39A11Q8N1S5 342 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 TTC9BQ8N6N2 239 aa8.2□□□□□ -1.1
CBWD1-228ENST00000619157 SYT2Q8N9I0 419 aaPredicted RBP8.2□□□□□ -1.1
CBWD1-228ENST00000619157 VN1R2Q8NFZ6 395 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms