RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 TCEA3O75764 348 aa26.55■■□□□ 1.84
VEGFC-202ENST00000618562 TRIP13Q15645 432 aaPredicted RBP26.55■■□□□ 1.84
VEGFC-202ENST00000618562 CCHCR1Q8TD31 782 aa26.55■■□□□ 1.84
VEGFC-202ENST00000618562 IPO4Q8TEX9 1081 aaKnown RBP26.55■■□□□ 1.84
VEGFC-202ENST00000618562 CABS1Q96KC9 395 aa26.55■■□□□ 1.84
VEGFC-202ENST00000618562 TRIM17Q9Y577 477 aa26.55■■□□□ 1.84
VEGFC-202ENST00000618562 E5RJQ4 531 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 YY1P25490 414 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 GJC1P36383 396 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 COPS2P61201 443 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 RNF187Q5TA31 235 aaPredicted RBP26.54■■□□□ 1.84
VEGFC-202ENST00000618562 PMF1Q6P1K2 205 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 DRICH1Q6PGQ1 229 aaPredicted RBP26.54■■□□□ 1.84
VEGFC-202ENST00000618562 OSTM1Q86WC4 334 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 RNF169Q8NCN4 708 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 SH3TC2Q8TF17 1288 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 FNIP1Q8TF40 1166 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 PIK3R2O00459 728 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 WARSP23381 471 aaKnown RBP26.54■■□□□ 1.84
VEGFC-202ENST00000618562 PTPN7P35236 360 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 CLCNKBP51801 687 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 CCDC121Q6ZUS5 278 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 EMC1Q8N766 993 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 SLC35F5Q8WV83 523 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 P3H4Q92791 437 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 SLITRK1Q96PX8 696 aa26.54■■□□□ 1.84
VEGFC-202ENST00000618562 TDRD15B5MCY1 1934 aaKnown RBP26.54■■□□□ 1.84
VEGFC-202ENST00000618562 CYB561D2O14569 222 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 CCDC130P13994 396 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 KLRC2P26717 231 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 RGS7P49802 495 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 MBTPS1Q14703 1052 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 LONRF1Q17RB8 773 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 ATP13A4Q4VNC1 1196 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.53■■□□□ 1.84
VEGFC-202ENST00000618562 RSAD1Q9HA92 442 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 TMEM51Q9NW97 253 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 HESX1Q9UBX0 185 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 PHF24Q9UPV7 400 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 TJP3O95049 919 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 IBSPP21815 317 aaPredicted RBP26.53■■□□□ 1.84
VEGFC-202ENST00000618562 PSMA2P25787 234 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 ANKS1BQ7Z6G8 1248 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 EXOC3L1Q86VI1 746 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 C3orf58Q8NDZ4 430 aa26.53■■□□□ 1.84
VEGFC-202ENST00000618562 PIWIL1Q96J94 861 aaKnown RBP26.53■■□□□ 1.84
VEGFC-202ENST00000618562 SETSIPP0DME0 302 aa26.52■■□□□ 1.84
VEGFC-202ENST00000618562 PDE4CQ08493 712 aa26.52■■□□□ 1.84
VEGFC-202ENST00000618562 FAM102AQ5T9C2 384 aaPredicted RBP26.52■■□□□ 1.84
VEGFC-202ENST00000618562 IZUMO3Q5VZ72 239 aa26.52■■□□□ 1.84
VEGFC-202ENST00000618562 WSCD1Q658N2 575 aa26.52■■□□□ 1.84
VEGFC-202ENST00000618562 TXNRD3NBQ6F5E7 133 aa26.52■■□□□ 1.84
VEGFC-202ENST00000618562 FAM183BPQ6ZVS7 135 aa26.52■■□□□ 1.84
VEGFC-202ENST00000618562 ARFGAP1Q8N6T3 406 aa26.52■■□□□ 1.84
VEGFC-202ENST00000618562 SLC4A5Q9BY07 1137 aa26.52■■□□□ 1.84
VEGFC-202ENST00000618562 NINJ2Q9NZG7 142 aa26.52■■□□□ 1.84
VEGFC-202ENST00000618562 LIASO43766 372 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 KRT1P04264 644 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 VPS41P49754 854 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 PAAF1Q9BRP4 392 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 ACTR5Q9H9F9 607 aaPredicted RBP26.51■■□□□ 1.83
VEGFC-202ENST00000618562 KLHL11Q9NVR0 708 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 DDX56Q9NY93 547 aaKnown RBP26.51■■□□□ 1.83
VEGFC-202ENST00000618562 CASTOR2A6NHX0 329 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 ARVCFO00192 962 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 GABBR2O75899 941 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 ADORA2BP29275 332 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 KYNUQ16719 465 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 OR6B2Q6IFH4 312 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 HIBCHQ6NVY1 386 aaPredicted RBP26.51■■□□□ 1.83
VEGFC-202ENST00000618562 GSTA5Q7RTV2 222 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 SENP8Q96LD8 212 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 MIS12Q9H081 205 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 CAPN7Q9Y6W3 813 aa26.51■■□□□ 1.83
VEGFC-202ENST00000618562 GABRDO14764 452 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 ACTN3Q08043 901 aaPredicted RBP26.5■■□□□ 1.83
VEGFC-202ENST00000618562 TMEM110Q86TL2 294 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 ZNF598Q86UK7 904 aaKnown RBP26.5■■□□□ 1.83
VEGFC-202ENST00000618562 ECHDC2Q86YB7 292 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 ANKRD52Q8NB46 1076 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 ARHGEF2Q92974 986 aaKnown RBP26.5■■□□□ 1.83
VEGFC-202ENST00000618562 TNIP3Q96KP6 325 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 KBTBD13C9JR72 458 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 LRCH4O75427 683 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 POMCP01189 267 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 UPP1Q16831 310 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 MFSD7Q6UXD7 560 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 SPOCD1Q6ZMY3 1216 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 CNPY4Q8N129 248 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 ZCCHC9Q8N567 271 aaKnown RBP26.5■■□□□ 1.83
VEGFC-202ENST00000618562 B3GALNT2Q8NCR0 500 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 STK32AQ8WU08 396 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 PGBD4Q96DM1 585 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 FAM118BQ9BPY3 351 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 UNC93B1Q9H1C4 597 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 LGALS13Q9UHV8 139 aa26.5■■□□□ 1.83
VEGFC-202ENST00000618562 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.5■■□□□ 1.83
VEGFC-202ENST00000618562 ATP2C2O75185 946 aa26.49■■□□□ 1.83
VEGFC-202ENST00000618562 FAM163BP0C2L3 166 aa26.49■■□□□ 1.83
VEGFC-202ENST00000618562 RPL9P32969 192 aaKnown RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms