RNA–Protein interactions for RNA: ENST00000618078.1

CBX5-206, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 2,627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-206ENST00000618078 WARSP23381 471 aaKnown RBP15.87■□□□□ 0.13
CBX5-206ENST00000618078 HDAC4P56524 1084 aa15.87■□□□□ 0.13
CBX5-206ENST00000618078 IFI35P80217 286 aaPredicted RBP15.87■□□□□ 0.13
CBX5-206ENST00000618078 PTGISQ16647 500 aa15.87■□□□□ 0.13
CBX5-206ENST00000618078 CCSAPQ6IQ19 270 aaPredicted RBP15.87■□□□□ 0.13
CBX5-206ENST00000618078 TRMT10CQ7L0Y3 403 aaKnown RBP15.87■□□□□ 0.13
CBX5-206ENST00000618078 TOP6BLQ8N6T0 577 aa15.87■□□□□ 0.13
CBX5-206ENST00000618078 RNF169Q8NCN4 708 aa15.87■□□□□ 0.13
CBX5-206ENST00000618078 KLHDC9Q8NEP7 349 aa15.87■□□□□ 0.13
CBX5-206ENST00000618078 STK32AQ8WU08 396 aa15.87■□□□□ 0.13
CBX5-206ENST00000618078 C9orf72Q96LT7 481 aa15.87■□□□□ 0.13
CBX5-206ENST00000618078 TRMT13Q9NUP7 481 aaKnown RBP15.87■□□□□ 0.13
CBX5-206ENST00000618078 ARL5CA6NH57 179 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 CASTOR2A6NHX0 329 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 ENDOD1O94919 500 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 CAV1Q03135 178 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 LONRF1Q17RB8 773 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 PAQR9Q6ZVX9 377 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 TSPAN18Q96SJ8 248 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 SNRNP25Q9BV90 132 aaKnown RBP15.86■□□□□ 0.13
CBX5-206ENST00000618078 SLC12A6Q9UHW9 1150 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 PADI3Q9ULW8 664 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 KIF3CO14782 793 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 NKX3-2P78367 333 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 GAD2Q05329 585 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 PIGZQ86VD9 579 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 UNC45BQ8IWX7 931 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 SENP8Q96LD8 212 aa15.86■□□□□ 0.13
CBX5-206ENST00000618078 APOC4-APOC2K7ER74 178 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 MAP3K6O95382 1288 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 TTC4O95801 387 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 APOC2P02655 101 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 IL4RP24394 825 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 MDH1P40925 334 aaKnown RBP15.85■□□□□ 0.13
CBX5-206ENST00000618078 PPP2R2AP63151 447 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 HP1BP3Q5SSJ5 553 aaPredicted RBP15.85■□□□□ 0.13
CBX5-206ENST00000618078 RSAD1Q9HA92 442 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 PCDH9Q9HC56 1237 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 CALCOCO1Q9P1Z2 691 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 I3L4J1 428 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 THP07101 528 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 EIF3EP60228 445 aaKnown RBP15.85■□□□□ 0.13
CBX5-206ENST00000618078 ADIGQ0VDE8 80 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 KRT81Q14533 505 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 FASTKD3Q14CZ7 662 aaKnown RBP15.85■□□□□ 0.13
CBX5-206ENST00000618078 MDH1BQ5I0G3 518 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 SLC26A9Q7LBE3 791 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 ZCCHC9Q8N567 271 aaKnown RBP15.85■□□□□ 0.13
CBX5-206ENST00000618078 BBOF1Q8ND07 529 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 TNIP3Q96KP6 325 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 RBM15Q96T37 977 aaKnown RBP eCLIP15.85■□□□□ 0.135e-7■□□□□ 9
CBX5-206ENST00000618078 GPBP1L1Q9HC44 474 aaPredicted RBP15.85■□□□□ 0.13
CBX5-206ENST00000618078 PCDH18Q9HCL0 1135 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 CRTAC1Q9NQ79 661 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 CTNNAL1Q9UBT7 734 aa15.85■□□□□ 0.13
CBX5-206ENST00000618078 TPX2Q9ULW0 747 aaKnown RBP15.85■□□□□ 0.13
CBX5-206ENST00000618078 ZNF638Q14966 1978 aaKnown RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 RGS16O15492 202 aaPredicted RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 ALDH1A1P00352 501 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 PTPN1P18031 435 aaKnown RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 LSP1P33241 339 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 RPL34P49207 117 aaKnown RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 SP3Q02447 781 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 AUHQ13825 339 aaKnown RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 PAN2Q504Q3 1202 aaKnown RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 RNASEH2BQ5TBB1 312 aaKnown RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 C1orf228Q6PIY5 440 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 ZC3H18Q86VM9 953 aaKnown RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 MDM1Q8TC05 714 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 SPATA18Q8TC71 538 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 LRRN4Q8WUT4 740 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 DDX43Q9NXZ2 648 aaKnown RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 GOLGA8MH3BSY2 632 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 GABRDO14764 452 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 RASGRF2O14827 1237 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 BANF1O75531 89 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 POMCP01189 267 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 RBP3P10745 1247 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 NDUFV1P49821 464 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 LPIN1Q14693 890 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 CCDC38Q502W7 563 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 ANKRD22Q5VYY1 191 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 PQLC3Q8N755 202 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 FAM71DQ8N9W8 422 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 TTC13Q8NBP0 860 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 CCHCR1Q8TD31 782 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 PGM2Q96G03 612 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 HHIPL1Q96JK4 782 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 RNF157Q96PX1 679 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 HNRNPABQ99729 332 aaKnown RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 C11orf84Q9BUA3 381 aaPredicted RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 CHST12Q9NRB3 414 aa15.84■□□□□ 0.13
CBX5-206ENST00000618078 TDRD15B5MCY1 1934 aaKnown RBP15.84■□□□□ 0.13
CBX5-206ENST00000618078 FOXO6A8MYZ6 492 aa15.83■□□□□ 0.13
CBX5-206ENST00000618078 GPR182O15218 404 aa15.83■□□□□ 0.13
CBX5-206ENST00000618078 RPL22P35268 128 aaKnown RBP15.83■□□□□ 0.13
CBX5-206ENST00000618078 PITX1P78337 314 aaPredicted RBP15.83■□□□□ 0.13
CBX5-206ENST00000618078 ADCY1Q08828 1119 aa15.83■□□□□ 0.13
CBX5-206ENST00000618078 PPP6R3Q5H9R7 873 aaPredicted RBP15.83■□□□□ 0.13
CBX5-206ENST00000618078 RPAINQ86UA6 219 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms