RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 CCDC33Q8N5R6 958 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
POLR2A-209ENST00000617998 AUTS2Q8WXX7 1259 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 DPH5Q9H2P9 285 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 MSH2P43246 934 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 FXR2P51116 673 aaKnown RBP eCLIP11.35□□□□□ -0.591e-7■■■■■ 29.9
POLR2A-209ENST00000617998 KCNA1Q09470 495 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 HSDL1Q3SXM5 330 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 RAET1GQ6H3X3 334 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 TFAP2DQ7Z6R9 452 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 RNF135Q8IUD6 432 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 CYP4X1Q8N118 509 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 TXLNGQ9NUQ3 528 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 RUVBL2Q9Y230 463 aaKnown RBP11.35□□□□□ -0.59
POLR2A-209ENST00000617998 HBS1LQ9Y450 684 aaKnown RBP11.35□□□□□ -0.59
POLR2A-209ENST00000617998 NEMP2A6NFY4 417 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 GPR1P46091 355 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 CSTF1Q05048 431 aaKnown RBP11.35□□□□□ -0.59
POLR2A-209ENST00000617998 ZC3H18Q86VM9 953 aaKnown RBP11.35□□□□□ -0.59
POLR2A-209ENST00000617998 LZTR1Q8N653 840 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 ZNF564Q8TBZ8 553 aaPredicted RBP11.35□□□□□ -0.59
POLR2A-209ENST00000617998 UHRF1Q96T88 793 aaPredicted RBP11.35□□□□□ -0.59
POLR2A-209ENST00000617998 RUSC1Q9BVN2 902 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 ABCC13Q9NSE7 274 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 TMEM51Q9NW97 253 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 GTF3C4Q9UKN8 822 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 SLC37A4O43826 429 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 SLC2A4P14672 509 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 DDR2Q16832 855 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 ANO7Q6IWH7 933 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 ZNF655Q8N720 491 aaPredicted RBP11.35□□□□□ -0.59
POLR2A-209ENST00000617998 STK33Q9BYT3 514 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 KDM4CQ9H3R0 1056 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 WBP1LQ9NX94 342 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 ERVW-1Q9UQF0 538 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 GSTA4O15217 222 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 MAFO75444 373 aaPredicted RBP11.35□□□□□ -0.59
POLR2A-209ENST00000617998 GJA9P57773 515 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 IRF5Q13568 498 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 TRAPPC11Q7Z392 1133 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 CLYBLQ8N0X4 340 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 OSBPL2Q9H1P3 480 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 MORF4L1Q9UBU8 362 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 NUDT5Q9UKK9 219 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 HYOU1Q9Y4L1 999 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 PARP4Q9UKK3 1724 aaKnown RBP11.34□□□□□ -0.59
POLR2A-209ENST00000617998 CASP6P55212 293 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 TRIP13Q15645 432 aaPredicted RBP11.34□□□□□ -0.59
POLR2A-209ENST00000617998 ANKS4BQ8N8V4 417 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 GPR152Q8TDT2 470 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 CPA5Q8WXQ8 436 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 FBXL18Q96ME1 805 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 NELL2Q99435 816 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 METTL5Q9NRN9 209 aaKnown RBP11.34□□□□□ -0.59
POLR2A-209ENST00000617998 STARD13Q9Y3M8 1113 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 ZNF711Q9Y462 761 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 P4HA2O15460 535 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 TTI1O43156 1089 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 MTSS1O43312 755 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 PLA2G6O60733 806 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 PYGLP06737 847 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 RPL17P18621 184 aaKnown RBP11.34□□□□□ -0.59
POLR2A-209ENST00000617998 RRM1P23921 792 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 RFX3P48380 749 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 DUSP3P51452 185 aaPredicted RBP11.34□□□□□ -0.59
POLR2A-209ENST00000617998 CYB5D1Q6P9G0 228 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 USP45Q70EL2 814 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 TMEM176AQ96HP8 235 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 TRIM10Q9UDY6 481 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 LIMA1Q9UHB6 759 aaKnown RBP11.34□□□□□ -0.59
POLR2A-209ENST00000617998 RIPK3Q9Y572 518 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 GUCA1AP43080 201 aaPredicted RBP11.34□□□□□ -0.59
POLR2A-209ENST00000617998 BLKP51451 505 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 SDHAF4Q5VUM1 108 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 DTNBP1Q96EV8 351 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 GOLGA8QA0A0J9YX86 632 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 GOLGA8OA6NCC3 632 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 HMGB1P1B2RPK0 211 aaPredicted RBP11.34□□□□□ -0.59
POLR2A-209ENST00000617998 GOLGA8NF8WBI6 632 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 SUN1O94901 812 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 CUL2Q13617 745 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 MMS22LQ6ZRQ5 1243 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 C12orf42Q96LP6 360 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 MCEEQ96PE7 176 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 RRN3Q9NYV6 651 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 FTLP02792 175 aaPredicted RBP11.34□□□□□ -0.59
POLR2A-209ENST00000617998 PTPN1P18031 435 aaKnown RBP11.34□□□□□ -0.59
POLR2A-209ENST00000617998 CTNNA1P35221 906 aaKnown RBP11.34□□□□□ -0.59
POLR2A-209ENST00000617998 FOXM1Q08050 763 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 TRAPPC5Q8IUR0 188 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 C10orf71Q711Q0 1435 aa11.34□□□□□ -0.59
POLR2A-209ENST00000617998 SYN3O14994 580 aa11.33□□□□□ -0.59
POLR2A-209ENST00000617998 ZNF75DP51815 510 aa11.33□□□□□ -0.59
POLR2A-209ENST00000617998 ADIGQ0VDE8 80 aa11.33□□□□□ -0.59
POLR2A-209ENST00000617998 AARS2Q5JTZ9 985 aaKnown RBP11.33□□□□□ -0.59
POLR2A-209ENST00000617998 ZBTB41Q5SVQ8 909 aa11.33□□□□□ -0.59
POLR2A-209ENST00000617998 TPRG1Q6ZUI0 275 aa11.33□□□□□ -0.59
POLR2A-209ENST00000617998 COLGALT2Q8IYK4 626 aa11.33□□□□□ -0.59
POLR2A-209ENST00000617998 HES6Q96HZ4 224 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms