RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	TGFB2	P61812	414 aa		11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	CXCL9	Q07325	125 aa		11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	RABGAP1L	Q5R372	815 aa		11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	PCGF5	Q86SE9	256 aa		11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	TRIM50	Q86XT4	487 aa		11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	SLC9A9	Q8IVB4	645 aa		11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	DDHD1	Q8NEL9	900 aa		11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	PRMT6	Q96LA8	375 aa	Predicted RBP	11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	HERPUD2	Q9BSE4	406 aa		11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	TDRD3	Q9H7E2	651 aa	Known RBP	11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	SLC38A7	Q9NVC3	462 aa		11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	MKS1	Q9NXB0	559 aa		11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	GNPTG	Q9UJJ9	305 aa		11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	DRG1	Q9Y295	367 aa	Known RBP	11.15	□□□□□ -0.62
CPEB1-215	ENST00000617958	PRR5-ARHGAP8	B1AHC4	643 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	LSM1	O15116	133 aa	Known RBP	11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	CYP26A1	O43174	497 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	KRT38	O76015	456 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	MT-ND3	P03897	115 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	FDX1	P10109	184 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	CYP2C9	P11712	490 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	CDH3	P22223	829 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	COPA	P53621	1224 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	ARHGAP8	P85298	464 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	CETN1	Q12798	172 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	FASTKD3	Q14CZ7	662 aa	Known RBP	11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	IL23R	Q5VWK5	629 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	SNRNP48	Q6IEG0	339 aa	Known RBP	11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	CPNE8	Q86YQ8	564 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	SLFN12	Q8IYM2	578 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	FAM71A	Q8IYT1	594 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	ARL10	Q8N8L6	244 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	TMEM174	Q8WUU8	243 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	EYA3	Q99504	573 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	HEPH	Q9BQS7	1158 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	GPATCH1	Q9BRR8	931 aa	Known RBP	11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	GIN1	Q9NXP7	522 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	B3GNT3	Q9Y2A9	372 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	FRMD4B	Q9Y2L6	1034 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	GJA3	Q9Y6H8	435 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	CLUH	O75153	1309 aa		11.15	□□□□□ -0.63
CPEB1-215	ENST00000617958	DENND3	A2RUS2	1198 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	MARCH6	O60337	910 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	CNOT3	O75175	753 aa	Known RBP	11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	MOXD1	Q6UVY6	613 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	KATNAL2	Q8IYT4	538 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	FBXW8	Q8N3Y1	598 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	TSPAN14	Q8NG11	270 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	ATP6V0A1	Q93050	837 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	BTBD6	Q96KE9	485 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	MBOAT7	Q96N66	472 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	PIGS	Q96S52	555 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	KCNK16	Q96T55	309 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	OLFM1	Q99784	485 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	FAM96A	Q9H5X1	160 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	SIRPG	Q9P1W8	387 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	ARFGEF1	Q9Y6D6	1849 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	USP17L3	A6NCW0	530 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	USP17L4	A6NCW7	530 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	C2orf71	A6NGG8	1288 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958		E5RJQ4	531 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958		E7ESA3	106 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	CLIC2	O15247	247 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	MED24	O75448	989 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	BMP10	O95393	424 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	GCNT3	O95395	438 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	CYP3A7	P24462	503 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	RPA1	P27694	616 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	MAPK4	P31152	587 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	STT3A	P46977	705 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	NOV	P48745	357 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	ARPC4	P59998	168 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	BFSP1	Q12934	665 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	SEPT6	Q14141	434 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	ADGRE1	Q14246	886 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	GSTA5	Q7RTV2	222 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	USP17L1	Q7RTZ2	530 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	CRLF3	Q8IUI8	442 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	HM13	Q8TCT9	377 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	BCAP29	Q9UHQ4	241 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	CCPG1	Q9ULG6	757 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	FZD1	Q9UP38	647 aa		11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.14	□□□□□ -0.63
CPEB1-215	ENST00000617958	IQCA1L	A6NCM1	817 aa		11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	TRIM64C	A6NLI5	447 aa		11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	LIAS	O43766	372 aa		11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	SNN	O75324	88 aa	Predicted RBP	11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	TBCA	O75347	108 aa	Known RBP	11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	OXSR1	O95747	527 aa	Predicted RBP	11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	RALA	P11233	206 aa		11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	CRK	P46108	304 aa		11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	CCT8	P50990	548 aa		11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	TXNL4A	P83876	142 aa	Known RBP	11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	FMO1	Q01740	532 aa		11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	TEX44	Q53QW1	395 aa		11.13	□□□□□ -0.63
CPEB1-215	ENST00000617958	PODN	Q7Z5L7	613 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms