RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 ZMIZ2Q8NF64 920 aa26.69■■□□□ 1.86
VEGFA-228ENST00000617771 CYFIP2Q96F07 1278 aa26.69■■□□□ 1.86
VEGFA-228ENST00000617771 HNRNPABQ99729 332 aaKnown RBP26.69■■□□□ 1.86
VEGFA-228ENST00000617771 LINC00597Q9H2U6 94 aa26.69■■□□□ 1.86
VEGFA-228ENST00000617771 SMPD4Q9NXE4 827 aa26.69■■□□□ 1.86
VEGFA-228ENST00000617771 CHORDC1Q9UHD1 332 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-228ENST00000617771 CIZ1Q9ULV3 898 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-228ENST00000617771 HELZP42694 1942 aaKnown RBP26.69■■□□□ 1.86
VEGFA-228ENST00000617771 FAM92AA1XBS5 289 aa26.68■■□□□ 1.86
VEGFA-228ENST00000617771 SLC9A3R1O14745 358 aaPredicted RBP26.68■■□□□ 1.86
VEGFA-228ENST00000617771 PSMA7O14818 248 aa26.68■■□□□ 1.86
VEGFA-228ENST00000617771 BEST1O76090 585 aa26.68■■□□□ 1.86
VEGFA-228ENST00000617771 TUBP50607 506 aa26.68■■□□□ 1.86
VEGFA-228ENST00000617771 GALK1P51570 392 aa26.68■■□□□ 1.86
VEGFA-228ENST00000617771 SEMA4DQ92854 862 aa26.68■■□□□ 1.86
VEGFA-228ENST00000617771 CD101Q93033 1021 aa26.68■■□□□ 1.86
VEGFA-228ENST00000617771 GMIPQ9P107 970 aa26.68■■□□□ 1.86
VEGFA-228ENST00000617771 ATG13O75143 517 aa26.67■■□□□ 1.86
VEGFA-228ENST00000617771 EGFP01133 1207 aa26.67■■□□□ 1.86
VEGFA-228ENST00000617771 PMS1P54277 932 aaKnown RBP26.67■■□□□ 1.86
VEGFA-228ENST00000617771 FBXO43Q4G163 708 aa26.67■■□□□ 1.86
VEGFA-228ENST00000617771 DHTKD1Q96HY7 919 aaPredicted RBP26.67■■□□□ 1.86
VEGFA-228ENST00000617771 CFAP97Q9P2B7 532 aa26.67■■□□□ 1.86
VEGFA-228ENST00000617771 MAN1B1Q9UKM7 699 aa26.67■■□□□ 1.86
VEGFA-228ENST00000617771 SMG5Q9UPR3 1016 aaKnown RBP26.67■■□□□ 1.86
VEGFA-228ENST00000617771 TRIM49BA6NDI0 452 aa26.66■■□□□ 1.86
VEGFA-228ENST00000617771 COCHO43405 550 aa26.66■■□□□ 1.86
VEGFA-228ENST00000617771 ZDHHC11BP0C7U3 371 aa26.66■■□□□ 1.86
VEGFA-228ENST00000617771 CLEC20AQ6ZU45 233 aa26.66■■□□□ 1.86
VEGFA-228ENST00000617771 FILIP1Q7Z7B0 1213 aa26.66■■□□□ 1.86
VEGFA-228ENST00000617771 WHAMMQ8TF30 809 aa26.66■■□□□ 1.86
VEGFA-228ENST00000617771 SECISBP2LQ93073 1101 aaKnown RBP26.66■■□□□ 1.86
VEGFA-228ENST00000617771 FAM124BQ9H5Z6 455 aaPredicted RBP26.66■■□□□ 1.86
VEGFA-228ENST00000617771 PNPLA8Q9NP80 782 aa26.66■■□□□ 1.86
VEGFA-228ENST00000617771 NCDNQ9UBB6 729 aa26.66■■□□□ 1.86
VEGFA-228ENST00000617771 ARMCX3Q9UH62 379 aaPredicted RBP26.66■■□□□ 1.86
VEGFA-228ENST00000617771 K7ESF4 209 aa26.65■■□□□ 1.86
VEGFA-228ENST00000617771 ISM2Q6H9L7 571 aa26.65■■□□□ 1.86
VEGFA-228ENST00000617771 LONP2Q86WA8 852 aa26.65■■□□□ 1.86
VEGFA-228ENST00000617771 NACA2Q9H009 215 aa26.65■■□□□ 1.86
VEGFA-228ENST00000617771 METTL14Q9HCE5 456 aaKnown RBP26.65■■□□□ 1.86
VEGFA-228ENST00000617771 FBRSL1Q9HCM7 1045 aaKnown RBP26.65■■□□□ 1.86
VEGFA-228ENST00000617771 TLR8Q9NR97 1041 aaKnown RBP26.65■■□□□ 1.86
VEGFA-228ENST00000617771 RAB23Q9ULC3 237 aa26.65■■□□□ 1.86
VEGFA-228ENST00000617771 CHURC1-FNTBB4DL54 471 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 RNF40O75150 1001 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 HOXA6P31267 233 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 FNTBP49356 437 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 CBWD6Q4V339 395 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 ZNF394Q53GI3 561 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 CBWD3Q5JTY5 395 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 CBWD5Q5RIA9 395 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 NAIF1Q69YI7 327 aaPredicted RBP26.64■■□□□ 1.86
VEGFA-228ENST00000617771 HEXIM2Q96MH2 286 aaKnown RBP26.64■■□□□ 1.86
VEGFA-228ENST00000617771 CCSER2Q9H7U1 834 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 CISHQ9NSE2 258 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 C2orf42Q9NWW7 574 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 TBC1D14Q9P2M4 693 aa26.64■■□□□ 1.86
VEGFA-228ENST00000617771 E2F8A0AVK6 867 aa26.63■■□□□ 1.85
VEGFA-228ENST00000617771 CNR2P34972 360 aa26.63■■□□□ 1.85
VEGFA-228ENST00000617771 CCDC26Q8TAB7 109 aa26.63■■□□□ 1.85
VEGFA-228ENST00000617771 JAKMIP2Q96AA8 810 aa26.63■■□□□ 1.85
VEGFA-228ENST00000617771 TMEM176AQ96HP8 235 aa26.63■■□□□ 1.85
VEGFA-228ENST00000617771 CEP63Q96MT8 703 aa26.63■■□□□ 1.85
VEGFA-228ENST00000617771 SLC8A2Q9UPR5 921 aa26.63■■□□□ 1.85
VEGFA-228ENST00000617771 SCML2Q9UQR0 700 aa26.63■■□□□ 1.85
VEGFA-228ENST00000617771 COQ4Q9Y3A0 265 aa26.63■■□□□ 1.85
VEGFA-228ENST00000617771 SH3BP1Q9Y3L3 701 aa26.63■■□□□ 1.85
VEGFA-228ENST00000617771 TLR5O60602 858 aa26.62■■□□□ 1.85
VEGFA-228ENST00000617771 GADD45BO75293 160 aaPredicted RBP26.62■■□□□ 1.85
VEGFA-228ENST00000617771 CYP17A1P05093 508 aa26.62■■□□□ 1.85
VEGFA-228ENST00000617771 DMWDQ09019 674 aa26.62■■□□□ 1.85
VEGFA-228ENST00000617771 PPP1R26Q5T8A7 1209 aaPredicted RBP26.62■■□□□ 1.85
VEGFA-228ENST00000617771 HEATR6Q6AI08 1181 aaKnown RBP26.62■■□□□ 1.85
VEGFA-228ENST00000617771 PKN3Q6P5Z2 889 aa26.62■■□□□ 1.85
VEGFA-228ENST00000617771 ADGRG2Q8IZP9 1017 aa26.62■■□□□ 1.85
VEGFA-228ENST00000617771 TATDN2Q93075 761 aa26.62■■□□□ 1.85
VEGFA-228ENST00000617771 SLC35C1Q96A29 364 aa26.62■■□□□ 1.85
VEGFA-228ENST00000617771 OTUB2Q96DC9 234 aa26.62■■□□□ 1.85
VEGFA-228ENST00000617771 ZFRQ96KR1 1074 aaKnown RBP26.62■■□□□ 1.85
VEGFA-228ENST00000617771 DUSP16Q9BY84 665 aa26.62■■□□□ 1.85
VEGFA-228ENST00000617771 HHLA1C9JL84 531 aa26.61■■□□□ 1.85
VEGFA-228ENST00000617771 CD44P16070 742 aaKnown RBP26.61■■□□□ 1.85
VEGFA-228ENST00000617771 ACO1P21399 889 aaKnown RBP26.61■■□□□ 1.85
VEGFA-228ENST00000617771 DHCR24Q15392 516 aa26.61■■□□□ 1.85
VEGFA-228ENST00000617771 KLHL10Q6JEL2 608 aa26.61■■□□□ 1.85
VEGFA-228ENST00000617771 GPRIN1Q7Z2K8 1008 aa26.61■■□□□ 1.85
VEGFA-228ENST00000617771 KIAA2013Q8IYS2 634 aa26.61■■□□□ 1.85
VEGFA-228ENST00000617771 DCLK2Q8N568 766 aa26.61■■□□□ 1.85
VEGFA-228ENST00000617771 GMEB2Q9UKD1 530 aa26.61■■□□□ 1.85
VEGFA-228ENST00000617771 CFAP54Q96N23 3096 aa26.61■■□□□ 1.85
VEGFA-228ENST00000617771 BICDL2A1A5D9 508 aa26.6■■□□□ 1.85
VEGFA-228ENST00000617771 SCAMP3O14828 347 aaKnown RBP26.6■■□□□ 1.85
VEGFA-228ENST00000617771 ADH1CP00326 375 aa26.6■■□□□ 1.85
VEGFA-228ENST00000617771 YWHAEP62258 255 aaKnown RBP26.6■■□□□ 1.85
VEGFA-228ENST00000617771 CCDC40Q4G0X9 1142 aa26.6■■□□□ 1.85
VEGFA-228ENST00000617771 FOXR2Q6PJQ5 311 aa26.6■■□□□ 1.85
VEGFA-228ENST00000617771 PRR23BQ6ZRT6 265 aa26.6■■□□□ 1.85
VEGFA-228ENST00000617771 WDR5BQ86VZ2 330 aa26.6■■□□□ 1.85
VEGFA-228ENST00000617771 SLC4A11Q8NBS3 891 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms