RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ZBTB9Q96C00 473 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 CEP295NLQ96MC4 621 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 ZNF560Q96MR9 790 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 CLIC6Q96NY7 704 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 CYP2S1Q96SQ9 504 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 NUSAP1Q9BXS6 441 aaKnown RBP9.13□□□□□ -0.95
GPC6-202ENST00000617456 LINC00597Q9H2U6 94 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 SLC32A1Q9H598 525 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 CHCHD3Q9NX63 227 aaKnown RBP9.13□□□□□ -0.95
GPC6-202ENST00000617456 DPP3Q9NY33 737 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 KLK13Q9UKR3 277 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 CFAP45Q9UL16 551 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 SCN1AP35498 2009 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 ATXN2Q99700 1313 aaKnown RBP9.12□□□□□ -0.95
GPC6-202ENST00000617456 DMXL2Q8TDJ6 3036 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 TRAV19A0A0A6YYK7 116 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 KPNA7A9QM74 516 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 EIF3DO15371 548 aaKnown RBP eCLIP9.12□□□□□ -0.95
GPC6-202ENST00000617456 MAP3K13O43283 966 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 TADA3O75528 432 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 CKMP06732 381 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 USP17L7P0C7H9 530 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 CYP2F1P24903 491 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 SIM1P81133 766 aaPredicted RBP9.12□□□□□ -0.95
GPC6-202ENST00000617456 TSPY1Q01534 308 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 FAM160A1Q05DH4 1040 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 FOXD4Q12950 439 aaPredicted RBP9.12□□□□□ -0.95
GPC6-202ENST00000617456 NR1H3Q13133 447 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 ZNF268Q14587 947 aaPredicted RBP9.12□□□□□ -0.95
GPC6-202ENST00000617456 STK38Q15208 465 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 ZNF77Q15935 545 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 NFE2Q16621 373 aaPredicted RBP9.12□□□□□ -0.95
GPC6-202ENST00000617456 EML3Q32P44 896 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 LPCAT2Q7L5N7 544 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 DYMQ7RTS9 669 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 BRSK2Q8IWQ3 736 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 EFCAB13Q8IY85 973 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 TMEFF1Q8IYR6 380 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 ARL14EPQ8N8R7 260 aaPredicted RBP9.12□□□□□ -0.95
GPC6-202ENST00000617456 MDGA1Q8NFP4 955 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 SH3RF2Q8TEC5 729 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 USP33Q8TEY7 942 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 LEO1Q8WVC0 666 aaPredicted RBP9.12□□□□□ -0.95
GPC6-202ENST00000617456 SLC22A12Q96S37 553 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 ACBD6Q9BR61 282 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 ABCB6Q9NP58 842 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 FSCN3Q9NQT6 498 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 PANK4Q9NVE7 773 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 GDAP2Q9NXN4 497 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 ITGA11Q9UKX5 1188 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 NEUROG3Q9Y4Z2 214 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 ANK1P16157 1881 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 MYH11P35749 1972 aa9.12□□□□□ -0.95
GPC6-202ENST00000617456 UBE4BO95155 1302 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 PVALEFA0A1B0GWK0 134 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 TISP43B9A030 160 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 K7EQS6 105 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 ALDH1A2O94788 518 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 GCNT3O95395 438 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 MYL1P05976 194 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 ENGP17813 658 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 ACAT1P24752 427 aaKnown RBP9.11□□□□□ -0.95
GPC6-202ENST00000617456 LHX1P48742 406 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 ADCY2Q08462 1091 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 LMAN2Q12907 356 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 USP4Q13107 963 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 RASSF3Q86WH2 238 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 SYCP3Q8IZU3 236 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 FRMD1Q8N878 549 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 CCDC26Q8TAB7 109 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 ZNF507Q8TCN5 953 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 CNOT6LQ96LI5 555 aaKnown RBP9.11□□□□□ -0.95
GPC6-202ENST00000617456 C7orf25Q9BPX7 421 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 GTPBP2Q9BX10 602 aaKnown RBP9.11□□□□□ -0.95
GPC6-202ENST00000617456 TRIM9Q9C026 710 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 TBC1D7Q9P0N9 293 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 UXTQ9UBK9 157 aaPredicted RBP9.11□□□□□ -0.95
GPC6-202ENST00000617456 MMP17Q9ULZ9 603 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 MSRB2Q9Y3D2 182 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 JRKLQ9Y4A0 524 aa9.11□□□□□ -0.95
GPC6-202ENST00000617456 TSC2P49815 1807 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 PI4KAP42356 2102 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 C2orf78A6NCI8 922 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 ZNF233A6NK53 670 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 SCAMP3O14828 347 aaKnown RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 NOL4O94818 638 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 KLF8O95600 359 aaPredicted RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 NFATC1O95644 943 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 CFIP05156 583 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 ZSCAN22P10073 491 aaPredicted RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 IDEP14735 1019 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 HNRNPLP14866 589 aaKnown RBP eCLIP9.1□□□□□ -0.957e-7■■□□□ 12.7
GPC6-202ENST00000617456 TIE1P35590 1138 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 OPRD1P41143 372 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 PTGER3P43115 390 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 ATXN3P54252 364 aaPredicted RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 RPL10AP62906 217 aaKnown RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 RBP5P82980 135 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 CEBPZQ03701 1054 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms