RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 AKR1B10O60218 316 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 ZBED1O96006 694 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 F11P03951 625 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 ERBB2P04626 1255 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 FAM228BP0C875 321 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 GZMAP12544 262 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 CCR2P41597 374 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 NSFP46459 744 aaKnown RBP16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 EPHA5P54756 1037 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 SNX16P57768 344 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 CENPCQ03188 943 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 ASTE1Q2TB18 679 aaPredicted RBP16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 C2CD6Q53TS8 623 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 PM20D1Q6GTS8 502 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 GAREM2Q75VX8 874 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 TMTC1Q8IUR5 882 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 LEMD2Q8NC56 503 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 SMRP1Q8NCR6 262 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 MSANTD4Q8NCY6 345 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 IPO4Q8TEX9 1081 aaKnown RBP16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 C18orf8Q96DM3 657 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 TCEAL4Q96EI5 215 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 CCDC42Q96M95 316 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 RIPOR3Q96MK2 946 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 SLITRK1Q96PX8 696 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 ATXN3LQ9H3M9 355 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 CNGB3Q9NQW8 809 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 GMIPQ9P107 970 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 PTPRDP23468 1912 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 GRXCR2A6NFK2 248 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 NRG2O14511 850 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 ZNF197O14709 1029 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 PAPSS1O43252 624 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 FBXO21O94952 628 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 ABL1P00519 1130 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 FTLP02792 175 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 GJA1P17302 382 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 FECHP22830 423 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 MMP8P22894 467 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 MTHFRP42898 656 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 MRPS5P82675 430 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 GFPT1Q06210 699 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 SLC5A9Q2M3M2 681 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 CCDC122Q5T0U0 273 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 OR6B2Q6IFH4 312 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 MMS22LQ6ZRQ5 1243 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 PHLDB2Q86SQ0 1253 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 TMEM150AQ86TG1 271 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 DNAAF5Q86Y56 855 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 PHF13Q86YI8 300 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 ITFG1Q8TB96 612 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 CLEC4CQ8WTT0 213 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 PDLIM2Q96JY6 352 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 BAG1Q99933 345 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 C11orf70Q9BRQ4 267 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 WDR6Q9NNW5 1121 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 AVENQ9NQS1 362 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 TRPM5Q9NZQ8 1165 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 ADAM22Q9P0K1 906 aa16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 MRPS23Q9Y3D9 190 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 USP15Q9Y4E8 981 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-204ENST00000617222 A0A1W2PQH9 124 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 A0A1W2PRU2 124 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 ZNF840PA6NDX5 716 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 MBTPS2O43462 519 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 RTN2O75298 545 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 MOSPD3O75425 235 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 FGF19O95750 216 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 FSHRP23945 695 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 CDC25CP30307 473 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 GABRB2P47870 512 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 PGFP49763 221 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 DAOAP59103 153 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 SMAD4Q13485 552 aaKnown RBP16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 SLC18A3Q16572 532 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 LEXMQ3ZCV2 418 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 PRSS36Q5K4E3 855 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 SCD5Q86SK9 330 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 MON1AQ86VX9 555 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 MCOLN2Q8IZK6 566 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 SCML4Q8N228 414 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 PDZD8Q8NEN9 1154 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 SHKBP1Q8TBC3 707 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 SUSD6Q92537 303 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 GCNAQ96QF7 691 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 SPTLC3Q9NUV7 552 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 NAGPAQ9UK23 515 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 CLUHO75153 1309 aa16.41■□□□□ 0.22
PCDHGC3-204ENST00000617222 SOWAHDA6NJG2 315 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 YJEFN3A6XGL0 299 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 E7ENQ6 273 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 TADA3O75528 432 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 ZDHHC11BP0C7U3 371 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 CYP4F8P98187 520 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 PTP4A2Q12974 167 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 TEAD2Q15562 447 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 PPP1R2P3Q6NXS1 205 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 FAM183BPQ6ZVS7 135 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 MON1BQ7L1V2 547 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms