RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 GMIPQ9P107 970 aa23.43■■□□□ 1.34
CBWD3-212ENST00000616550 LEFTY2O00292 366 aa23.42■■□□□ 1.34
CBWD3-212ENST00000616550 OLFM2O95897 454 aa23.42■■□□□ 1.34
CBWD3-212ENST00000616550 AFPP02771 609 aaKnown RBP23.42■■□□□ 1.34
CBWD3-212ENST00000616550 MBL2P11226 248 aaPredicted RBP23.42■■□□□ 1.34
CBWD3-212ENST00000616550 ARSAP15289 507 aa23.42■■□□□ 1.34
CBWD3-212ENST00000616550 ALYREFQ86V81 257 aaKnown RBP23.42■■□□□ 1.34
CBWD3-212ENST00000616550 PHOX2BQ99453 314 aa23.42■■□□□ 1.34
CBWD3-212ENST00000616550 TLR8Q9NR97 1041 aaKnown RBP23.42■■□□□ 1.34
CBWD3-212ENST00000616550 CPQQ9Y646 472 aa23.42■■□□□ 1.34
CBWD3-212ENST00000616550 PATJQ8NI35 1801 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 HHLA1C9JL84 531 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 GOLGA6L22H0YM25 854 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 LAMTOR5O43504 91 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 ACO1P21399 889 aaKnown RBP23.41■■□□□ 1.34
CBWD3-212ENST00000616550 TUBP50607 506 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 SLC8A3P57103 927 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 LRRC32Q14392 662 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 PON2Q15165 354 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 TPD52L1Q16890 204 aaPredicted RBP23.41■■□□□ 1.34
CBWD3-212ENST00000616550 ARHGAP17Q68EM7 881 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 TXNDC11Q6PKC3 985 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 DDX42Q86XP3 938 aaKnown RBP eCLIP23.41■■□□□ 1.34
CBWD3-212ENST00000616550 CPA6Q8N4T0 437 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 EHBP1Q8NDI1 1231 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 ATP2A3Q93084 1043 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 SMPD4Q9NXE4 827 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 SCML2Q9UQR0 700 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 WNT6Q9Y6F9 365 aa23.41■■□□□ 1.34
CBWD3-212ENST00000616550 COCHO43405 550 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 ZDHHC11BP0C7U3 371 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 CHRNB1P11230 501 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 MRE11P49959 708 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 ZXDBP98169 803 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 NR1H3Q13133 447 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 DGKKQ5KSL6 1271 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 GPRIN1Q7Z2K8 1008 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 PPM1KQ8N3J5 372 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 KIAA1958Q8N8K9 716 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 LMO3Q8TAP4 145 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 NACA2Q9H009 215 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 CHRDQ9H2X0 955 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 ECT2Q9H8V3 914 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 DACH1Q9UI36 760 aa23.4■■□□□ 1.34
CBWD3-212ENST00000616550 MYO16Q9Y6X6 1858 aa23.39■■□□□ 1.34
CBWD3-212ENST00000616550 OTOL1A6NHN0 477 aaPredicted RBP23.39■■□□□ 1.33
CBWD3-212ENST00000616550 CD19P15391 556 aa23.39■■□□□ 1.33
CBWD3-212ENST00000616550 HOXD11P31277 338 aaPredicted RBP23.39■■□□□ 1.33
CBWD3-212ENST00000616550 EML3Q32P44 896 aa23.39■■□□□ 1.33
CBWD3-212ENST00000616550 SGO2Q562F6 1265 aa23.39■■□□□ 1.33
CBWD3-212ENST00000616550 ANKRD52Q8NB46 1076 aa23.39■■□□□ 1.33
CBWD3-212ENST00000616550 EXOC4Q96A65 974 aa23.39■■□□□ 1.33
CBWD3-212ENST00000616550 CNOT6LQ96LI5 555 aaKnown RBP23.39■■□□□ 1.33
CBWD3-212ENST00000616550 IER2Q9BTL4 223 aa23.39■■□□□ 1.33
CBWD3-212ENST00000616550 LINC00597Q9H2U6 94 aa23.39■■□□□ 1.33
CBWD3-212ENST00000616550 CCSER2Q9H7U1 834 aa23.39■■□□□ 1.33
CBWD3-212ENST00000616550 KIAA1257Q9ULG3 409 aa23.39■■□□□ 1.33
CBWD3-212ENST00000616550 PCDHB4Q9Y5E5 795 aa23.39■■□□□ 1.33
CBWD3-212ENST00000616550 SLC9A3R1O14745 358 aaPredicted RBP23.38■■□□□ 1.33
CBWD3-212ENST00000616550 SP9P0CG40 484 aa23.38■■□□□ 1.33
CBWD3-212ENST00000616550 NBL1P41271 181 aa23.38■■□□□ 1.33
CBWD3-212ENST00000616550 KIF11P52732 1056 aa23.38■■□□□ 1.33
CBWD3-212ENST00000616550 MTAPQ13126 283 aa23.38■■□□□ 1.33
CBWD3-212ENST00000616550 TMEM270Q6UE05 265 aa23.38■■□□□ 1.33
CBWD3-212ENST00000616550 MED15Q96RN5 788 aa23.38■■□□□ 1.33
CBWD3-212ENST00000616550 UBXN6Q9BZV1 441 aa23.38■■□□□ 1.33
CBWD3-212ENST00000616550 CFAP97Q9P2B7 532 aa23.38■■□□□ 1.33
CBWD3-212ENST00000616550 FBXO4Q9UKT5 387 aa23.38■■□□□ 1.33
CBWD3-212ENST00000616550 CYP26A1O43174 497 aa23.37■■□□□ 1.33
CBWD3-212ENST00000616550 TLR5O60602 858 aa23.37■■□□□ 1.33
CBWD3-212ENST00000616550 NFATC1O95644 943 aa23.37■■□□□ 1.33
CBWD3-212ENST00000616550 VDRP11473 427 aa23.37■■□□□ 1.33
CBWD3-212ENST00000616550 CSTF1Q05048 431 aaKnown RBP23.37■■□□□ 1.33
CBWD3-212ENST00000616550 GRSF1Q12849 480 aaKnown RBP eCLIP23.37■■□□□ 1.33
CBWD3-212ENST00000616550 DPCR1Q3MIW9 517 aa23.37■■□□□ 1.33
CBWD3-212ENST00000616550 RRAGAQ7L523 313 aa23.37■■□□□ 1.33
CBWD3-212ENST00000616550 MAML2Q8IZL2 1156 aaPredicted RBP23.37■■□□□ 1.33
CBWD3-212ENST00000616550 UBR7Q8N806 425 aa23.37■■□□□ 1.33
CBWD3-212ENST00000616550 HESX1Q9UBX0 185 aa23.37■■□□□ 1.33
CBWD3-212ENST00000616550 PROB1E7EW31 1015 aa23.36■■□□□ 1.33
CBWD3-212ENST00000616550 TRDMT1O14717 391 aaKnown RBP23.36■■□□□ 1.33
CBWD3-212ENST00000616550 ERCC5P28715 1186 aaPredicted RBP23.36■■□□□ 1.33
CBWD3-212ENST00000616550 GJA4P35212 333 aa23.36■■□□□ 1.33
CBWD3-212ENST00000616550 PGFP49763 221 aa23.36■■□□□ 1.33
CBWD3-212ENST00000616550 GCNT1Q02742 428 aa23.36■■□□□ 1.33
CBWD3-212ENST00000616550 GOLGA7BQ2TAP0 167 aa23.36■■□□□ 1.33
CBWD3-212ENST00000616550 MAMSTRQ6ZN01 415 aa23.36■■□□□ 1.33
CBWD3-212ENST00000616550 INTS2Q9H0H0 1204 aaKnown RBP23.36■■□□□ 1.33
CBWD3-212ENST00000616550 RBM12Q9NTZ6 932 aaKnown RBP23.36■■□□□ 1.33
CBWD3-212ENST00000616550 TBC1D14Q9P2M4 693 aa23.36■■□□□ 1.33
CBWD3-212ENST00000616550 TSPAN16Q9UKR8 245 aa23.36■■□□□ 1.33
CBWD3-212ENST00000616550 SH3BP1Q9Y3L3 701 aa23.36■■□□□ 1.33
CBWD3-212ENST00000616550 A0A1W2PQH9 124 aa23.35■■□□□ 1.33
CBWD3-212ENST00000616550 E2F8A0AVK6 867 aa23.35■■□□□ 1.33
CBWD3-212ENST00000616550 PAEPP09466 180 aa23.35■■□□□ 1.33
CBWD3-212ENST00000616550 ATP5C1P36542 298 aaKnown RBP23.35■■□□□ 1.33
CBWD3-212ENST00000616550 MTIF2P46199 727 aaKnown RBP23.35■■□□□ 1.33
CBWD3-212ENST00000616550 PSEN1P49768 467 aa23.35■■□□□ 1.33
CBWD3-212ENST00000616550 BCAT1P54687 386 aa23.35■■□□□ 1.33
CBWD3-212ENST00000616550 PPP2R5DQ14738 602 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms