RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 EMC10Q5UCC4 262 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 RAD54LQ92698 747 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 BICD1Q96G01 975 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 CRELD1Q96HD1 420 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 REEP2Q9BRK0 252 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 ZDHHC4Q9NPG8 344 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 GCNT4Q9P109 453 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 UXTQ9UBK9 157 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 A0A087X0B3 334 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 TCRBV21S2A2A0A5A6 115 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 C2orf78A6NCI8 922 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 BIN1O00499 593 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 PLS3P13797 630 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 SLC6A11P48066 632 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 SMTNP53814 917 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 SLC14A1Q13336 389 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 KYAT1Q16773 422 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 EOGTQ5NDL2 527 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 NAXDQ8IW45 347 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 TRMT2BQ96GJ1 504 aaKnown RBP18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 PLXNB3Q9ULL4 1909 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 ANK1P16157 1881 aa18.78■□□□□ 0.6
TRAPPC3-209ENST00000616395 IKBKBO14920 756 aa18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 OGTO15294 1046 aa18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 ADAM23O75077 832 aa18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 GJB3O75712 270 aa18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 SYPP08247 313 aa18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 ZNF33AQ06730 810 aa18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 HSF5Q4G112 596 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 TOGARAM2Q6ZUX3 1019 aa18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 RABEPKQ7Z6M1 372 aa18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 LARP4BQ92615 738 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 MYRFLQ96LU7 910 aa18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 ARHGAP26Q9UNA1 814 aa18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 APOBEC2Q9Y235 224 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 PI4KAP42356 2102 aa18.77■□□□□ 0.6
TRAPPC3-209ENST00000616395 MYMKA6NI61 221 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 GOLGA6L6A8MZA4 724 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 CYP17A1P05093 508 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 TCF3P15923 654 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 HDCP19113 662 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 CYP2F1P24903 491 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 KIR2DL1P43626 348 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 RPL10AP62906 217 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 ZXDBP98169 803 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 DPYDQ12882 1025 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 KCNB1Q14721 858 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 TMEM132DQ14C87 1099 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 SLC36A4Q6YBV0 504 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 SLCO6A1Q86UG4 719 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 SPATA20Q8TB22 786 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 SPATA18Q8TC71 538 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 PNKPQ96T60 521 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 TIPINQ9BVW5 301 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 KBTBD4Q9NVX7 518 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 MAN1B1Q9UKM7 699 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 PLXND1Q9Y4D7 1925 aa18.76■□□□□ 0.59
TRAPPC3-209ENST00000616395 KAT7O95251 611 aa18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 KRT18P05783 430 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 ERCC5P28715 1186 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 TAF6P49848 677 aa18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 LIG4P49917 911 aa18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 MYL5Q02045 173 aa18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 MORC3Q14149 939 aa18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 NFE2Q16621 373 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 CD302Q8IX05 232 aa18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 ZHX3Q9H4I2 956 aa18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 EXOC1Q9NV70 894 aa18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 KCNG1Q9UIX4 513 aa18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 CPSF3Q9UKF6 684 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-209ENST00000616395 C1QL1O75973 258 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 RPN1P04843 607 aaKnown RBP18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 APODP05090 189 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 TSPY1Q01534 308 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 DPCR1Q3MIW9 517 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 FILIP1Q7Z7B0 1213 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 LUZP1Q86V48 1076 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 C12orf40Q86WS4 652 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 SLC41A1Q8IVJ1 513 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 ERCC4Q92889 916 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 DKK4Q9UBT3 224 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 DERAQ9Y315 318 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 APC2O95996 2303 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 GON4LQ3T8J9 2241 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 A0A0B4J269 797 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 CYSRT1A8MQ03 144 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 LEFTY2O00292 366 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 HNRNPDLO14979 420 aaKnown RBP18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 FAM13AO94988 1023 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 PTMAP06454 111 aaKnown RBP18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 TPM3P06753 285 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 GABRG2P18507 467 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 KDSRQ06136 332 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 DHCR24Q15392 516 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 PLEKHG6Q3KR16 790 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 CNNM4Q6P4Q7 775 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 C11orf57Q6ZUT1 292 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 DYMQ7RTS9 669 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 GLRX5Q86SX6 157 aa18.74■□□□□ 0.59
TRAPPC3-209ENST00000616395 MARCH9Q86YJ5 346 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms