RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 HSMCR30P0CW71 290 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 LRRC63Q05C16 580 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 NFIAQ12857 509 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 PEX5LQ8IYB4 626 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 TRIM2Q9C040 744 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 PUS7LQ9H0K6 701 aaKnown RBP13.05□□□□□ -0.32
TCF4-248ENST00000616053 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
TCF4-248ENST00000616053 KIAA1257Q9ULG3 409 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 UAP1L1Q3KQV9 507 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 PPP1R15BQ5SWA1 713 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 KIAA0408Q6ZU52 694 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 ENOSF1Q7L5Y1 443 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 TSPYL6Q8N831 410 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 ZNF671Q8TAW3 534 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 CALR3Q96L12 384 aaKnown RBP13.05□□□□□ -0.32
TCF4-248ENST00000616053 ZNF232Q9UNY5 417 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 HYKKA2RU49 373 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 GCATO75600 419 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 PALMO75781 387 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 DLGAP3O95886 979 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 GDI2P50395 445 aaKnown RBP13.04□□□□□ -0.32
TCF4-248ENST00000616053 EFEMP1Q12805 493 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 NECAB2Q7Z6G3 386 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 EME1Q96AY2 570 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 CYLDQ9NQC7 956 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 ARIH1Q9Y4X5 557 aaPredicted RBP13.04□□□□□ -0.32
TCF4-248ENST00000616053 SETD1BQ9UPS6 1966 aaKnown RBP13.04□□□□□ -0.32
TCF4-248ENST00000616053 KERAO60938 352 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 CYP17A1P05093 508 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 TCN1P20061 433 aaPredicted RBP13.04□□□□□ -0.32
TCF4-248ENST00000616053 PPIL2Q13356 520 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 ARMCX4Q5H9R4 360 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 MDH1BQ5I0G3 518 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 TMEM143Q96AN5 459 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 RNF121Q9H920 327 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 SLC28A3Q9HAS3 691 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 CNGB3Q9NQW8 809 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 IGF1RP08069 1367 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 PFASO15067 1338 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 CHGBP05060 677 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 IL6P05231 212 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 CYP2A6P11509 494 aaPredicted RBP13.04□□□□□ -0.32
TCF4-248ENST00000616053 HSD3B1P14060 373 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 HIC1Q14526 733 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 CCSAPQ6IQ19 270 aaPredicted RBP13.04□□□□□ -0.32
TCF4-248ENST00000616053 ABHD5Q8WTS1 349 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 ELOVL6Q9H5J4 265 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 EXTL3O43909 919 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 PDHA1P08559 390 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 ARSEP51690 589 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 GRIK3Q13003 919 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 C4orf46Q504U0 113 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 ATP6V1C2Q8NEY4 427 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 HASPINQ8TF76 798 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 MIF4GDA9UHW6 222 aaKnown RBP13.04□□□□□ -0.32
TCF4-248ENST00000616053 RTN3O95197 1032 aaPredicted RBP13.04□□□□□ -0.32
TCF4-248ENST00000616053 ZNF682O95780 498 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 RASA1P20936 1047 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 INAVAQ3KP66 663 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 ZNF483Q8TF39 744 aaPredicted RBP13.04□□□□□ -0.32
TCF4-248ENST00000616053 SLC12A8A0AV02 714 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 GSAPA4D1B5 854 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 TMCC2O75069 709 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 GIMD1P0DJR0 217 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 IFNGR2P38484 337 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 PNPLA4P41247 253 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 TAF6P49848 677 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 SEPT1Q8WYJ6 367 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 KAT2BQ92831 832 aa13.04□□□□□ -0.32
TCF4-248ENST00000616053 TRIM43BA6NCK2 446 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 PLOD1Q02809 727 aaPredicted RBP13.03□□□□□ -0.32
TCF4-248ENST00000616053 SFR1Q86XK3 245 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 MAGEC3Q8TD91 643 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 RAD21L1Q9H4I0 556 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 VTA1Q9NP79 307 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 MTTPP55157 894 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 EFHC1Q5JVL4 640 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 PYHIN1Q6K0P9 492 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 SPATA21Q7Z572 469 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 NT5DC3Q86UY8 548 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 CCDC134Q9H6E4 229 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 PLB1Q6P1J6 1458 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 DTNBO60941 627 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 IL18RAPO95256 599 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 PHKG2P15735 406 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 SH3RF3Q8TEJ3 882 aaPredicted RBP13.03□□□□□ -0.32
TCF4-248ENST00000616053 SENP7Q9BQF6 1050 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 TBC1D10AQ9BXI6 508 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 ZNHIT2Q9UHR6 403 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 SNX24Q9Y343 169 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 SLC7A2P52569 658 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 FAM83EQ2M2I3 478 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 SLC9A4Q6AI14 798 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 LINC00523Q86TU6 105 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 HEMK1Q9Y5R4 338 aaPredicted RBP13.03□□□□□ -0.32
TCF4-248ENST00000616053 ANXA9O76027 345 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 ALPPL2P10696 532 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 EPHB2P29323 1055 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 ADORA1P30542 326 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 ELAVL2Q12926 359 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms