RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 MFSD14AQ96MC6 490 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 NR1H4Q96RI1 486 aaPredicted RBP13.69□□□□□ -0.22
FOXN3-219ENST00000615335 SMC6Q96SB8 1091 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 TXLNGYQ9BZA5 131 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 PPP1R12CQ9BZL4 782 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 DCLRE1BQ9H816 532 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 AGO3Q9H9G7 860 aaKnown RBP13.69□□□□□ -0.22
FOXN3-219ENST00000615335 ERVK-5Q9HDB9 667 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 IL1RAPL1Q9NZN1 696 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 BARX2Q9UMQ3 279 aaPredicted RBP13.69□□□□□ -0.22
FOXN3-219ENST00000615335 TMEM98Q9Y2Y6 226 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 ALG6Q9Y672 507 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 FAM189A1O60320 539 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 CD52P31358 61 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 RCN2Q14257 317 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 LPIN1Q14693 890 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 SLC20A1Q8WUM9 679 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 UCMAQ8WVF2 138 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 RSPH1Q8WYR4 309 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 ALG3Q92685 438 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 OLFM3Q96PB7 478 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 POP1Q99575 1024 aaKnown RBP13.68□□□□□ -0.22
FOXN3-219ENST00000615335 PRMT1Q99873 361 aaKnown RBP13.68□□□□□ -0.22
FOXN3-219ENST00000615335 LRMDAQ9H2I8 198 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 RHBDL2Q9NX52 303 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 RASAL2Q9UJF2 1139 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 PADI3Q9ULW8 664 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 MIF4GDA9UHW6 222 aaKnown RBP13.68□□□□□ -0.22
FOXN3-219ENST00000615335 AGTP01019 485 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 FTLP02792 175 aaPredicted RBP13.68□□□□□ -0.22
FOXN3-219ENST00000615335 STAG3L1P0CL83 205 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 SELPP16109 830 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 FAAP100Q0VG06 881 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 DCAF4L1Q3SXM0 396 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 MFSD4BQ5TF39 518 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 C1orf53Q5VUE5 145 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 TWF2Q6IBS0 349 aaKnown RBP13.68□□□□□ -0.22
FOXN3-219ENST00000615335 C11orf63Q6NUN7 778 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 LRRC8DQ7L1W4 858 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 ZNF554Q86TJ5 538 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 UBL4BQ8N7F7 174 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 PLEKHO2Q8TD55 490 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 INPP5DQ92835 1189 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 GATA6Q92908 595 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 TOX2Q96NM4 488 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 FNBP1Q96RU3 617 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 EIF2AQ9BY44 585 aaKnown RBP13.68□□□□□ -0.22
FOXN3-219ENST00000615335 TSPYL2Q9H2G4 693 aaPredicted RBP13.68□□□□□ -0.22
FOXN3-219ENST00000615335 ETNK1Q9HBU6 452 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 ZDHHC18Q9NUE0 388 aa13.68□□□□□ -0.22
FOXN3-219ENST00000615335 CPSF3Q9UKF6 684 aaKnown RBP13.68□□□□□ -0.22
FOXN3-219ENST00000615335 NCCRP1Q6ZVX7 275 aaPredicted RBP13.67□□□□□ -0.22
FOXN3-219ENST00000615335 JAMLQ86YT9 394 aa13.67□□□□□ -0.22
FOXN3-219ENST00000615335 ARHGEF19Q8IW93 802 aa13.67□□□□□ -0.22
FOXN3-219ENST00000615335 TMEM192Q8IY95 271 aa13.67□□□□□ -0.22
FOXN3-219ENST00000615335 BRD8Q9H0E9 1235 aa13.67□□□□□ -0.22
FOXN3-219ENST00000615335 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.67□□□□□ -0.22
FOXN3-219ENST00000615335 TMEM110-MUSTN1A8MSY1 372 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 NUDT17P0C025 328 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 TNNI1P19237 187 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 EN2P19622 333 aaPredicted RBP13.66□□□□□ -0.22
FOXN3-219ENST00000615335 GPC5P78333 572 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
FOXN3-219ENST00000615335 RNF43Q68DV7 783 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 TRAF7Q6Q0C0 670 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 TMC2Q8TDI7 906 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 FAM81BQ96LP2 452 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 CATSPER2Q96P56 530 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 CORO1BQ9BR76 489 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 ADAM7Q9H2U9 754 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 HIPK3Q9H422 1215 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
FOXN3-219ENST00000615335 UTP6Q9NYH9 597 aaKnown RBP13.66□□□□□ -0.22
FOXN3-219ENST00000615335 SNX24Q9Y343 169 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 P4HA2O15460 535 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 PHF2O75151 1096 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 SHBGP04278 402 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 ASLP04424 464 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 GCLMP48507 274 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 PMS2P54278 862 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 DRG2P55039 364 aaKnown RBP13.66□□□□□ -0.22
FOXN3-219ENST00000615335 PPP3CAQ08209 521 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 MBTPS1Q14703 1052 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 PSMD6Q15008 389 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 TCEAL1Q15170 157 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 KYAT1Q16773 422 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 LRRC26Q2I0M4 334 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 KLC3Q6P597 504 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 EXOC3L1Q86VI1 746 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 BRSK2Q8IWQ3 736 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 ACAP3Q96P50 834 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 DDX23Q9BUQ8 820 aaKnown RBP13.66□□□□□ -0.22
FOXN3-219ENST00000615335 TRPV5Q9NQA5 729 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 CHST12Q9NRB3 414 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 NMRK1Q9NWW6 199 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 HES2Q9Y543 173 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 SQORQ9Y6N5 450 aa13.66□□□□□ -0.22
FOXN3-219ENST00000615335 SIGLEC16A6NMB1 481 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 CXCL8P10145 99 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms