RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 KCNJ12Q14500 433 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 GAB4Q2WGN9 574 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 RAB6CQ53S08 254 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 EMC10Q5UCC4 262 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 DENND1BQ6P3S1 775 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 C4orf50Q6ZRC1 276 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 MFSD6LQ8IWD5 586 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 CCDC105Q8IYK2 499 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 NUP93Q8N1F7 819 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 AOPEPQ8N6M6 819 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 EHBP1Q8NDI1 1231 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 ELSPBP1Q96BH3 223 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 CEP63Q96MT8 703 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 FAM83CQ9BQN1 747 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 TUBGCP2Q9BSJ2 902 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 RAB6CQ9H0N0 254 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 CSNK1G1Q9HCP0 422 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 YJEFN3A6XGL0 299 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 E7ENQ6 273 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 O00370 1275 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 GREM1O60565 184 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 OAS1P00973 400 aaKnown RBP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 KLKB1P03952 638 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 KRT5P13647 590 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 MTIF2P46199 727 aaKnown RBP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 KRT31Q15323 416 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 MON1AQ86VX9 555 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 BBS7Q8IWZ6 715 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 DHX40Q8IX18 779 aaKnown RBP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 WDTC1Q8N5D0 677 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 RBBP8NLQ8NC74 664 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 SMARCD1Q96GM5 515 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 FUBP3Q96I24 572 aaKnown RBP eCLIP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 GBP4Q96PP9 640 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 HNRNPABQ99729 332 aaKnown RBP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 MIS12Q9H081 205 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 ABCB6Q9NP58 842 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 DMAP1Q9NPF5 467 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 AVENQ9NQS1 362 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 CALCOCO1Q9P1Z2 691 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 R4GN57 208 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 HELZP42694 1942 aaKnown RBP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 LEFTY2O00292 366 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 ZNF197O14709 1029 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 ECI2O75521 394 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 GRAP2O75791 330 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 LETM1O95202 739 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 GJB6O95452 261 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 FAM200BP0CF97 657 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 YWHAQP27348 245 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 MAGEA11P43364 429 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 TYRO3Q06418 890 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 FCHO2Q0JRZ9 810 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 ADIGQ0VDE8 80 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 MLF2Q15773 248 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 ZNF77Q15935 545 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 LUZP1Q86V48 1076 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 SCUBE3Q8IX30 993 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 SECISBP2LQ93073 1101 aaKnown RBP6.02□□□□□ -1.45
CPNE3-208ENST00000614678 C8orf48Q96LL4 319 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 FUCA2Q9BTY2 467 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 ULBP1Q9BZM6 244 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 IMPG2Q9BZV3 1241 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 CFAP97Q9P2B7 532 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 ZFHX4Q86UP3 3567 aa6.02□□□□□ -1.45
CPNE3-208ENST00000614678 MICAL2O94851 1124 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 C1RP00736 705 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TFE3P19532 575 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 CLCN1P35523 988 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 GGCXP38435 758 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 KIF11P52732 1056 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 AP3M2P53677 418 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 MARSP56192 900 aaKnown RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 RPL10AP62906 217 aaKnown RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 MTAPQ13126 283 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 PKDCCQ504Y2 493 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TCP11X2Q5H9J9 407 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 VSTM1Q6UX27 236 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TPGS1Q6ZTW0 290 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 ITIH5Q86UX2 942 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 MLKLQ8NB16 471 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 PJA1Q8NG27 643 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 BPIFB1Q8TDL5 484 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 DUSP16Q9BY84 665 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 NDST4Q9H3R1 872 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 XPO7Q9UIA9 1087 aaKnown RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 BICDL2A1A5D9 508 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 AOC1P19801 751 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 ANXA13P27216 316 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 SGSHP51688 502 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TKTL1P51854 596 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 LPAL2Q16609 132 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TAF3Q5VWG9 929 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 ASTLQ6HA08 431 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TRIML1Q8N9V2 468 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 SLC20A1Q8WUM9 679 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 MRPS31Q92665 395 aaKnown RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 CCDC34Q96HJ3 373 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TNIP3Q96KP6 325 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 SPATA17Q96L03 361 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms