RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 NUF2Q9BZD4 464 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 DHX35Q9H5Z1 703 aaKnown RBP12.24□□□□□ -0.45
CDH5-208ENST00000614547 RABGEF1Q9UJ41 708 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 MARF1Q9Y4F3 1742 aaKnown RBP12.24□□□□□ -0.45
CDH5-208ENST00000614547 M0QYV0 167 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 TPST1O60507 370 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 KRT7P08729 469 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 FGFR3P22607 806 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 IGBP1P78318 339 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 OCRLQ01968 901 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 OASLQ15646 514 aaKnown RBP12.24□□□□□ -0.45
CDH5-208ENST00000614547 NRF1Q16656 503 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 FASTKD1Q53R41 847 aaKnown RBP12.24□□□□□ -0.45
CDH5-208ENST00000614547 ACBD5Q5T8D3 534 aaPredicted RBP12.24□□□□□ -0.45
CDH5-208ENST00000614547 DLK2Q6UY11 383 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 TRIM74Q86UV6 250 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 TRIM73Q86UV7 250 aa12.24□□□□□ -0.45
CDH5-208ENST00000614547 ZC3H3Q8IXZ2 948 aaKnown RBP12.24□□□□□ -0.45
CDH5-208ENST00000614547 COPS7BQ9H9Q2 264 aaPredicted RBP12.24□□□□□ -0.45
CDH5-208ENST00000614547 SMAPO00193 183 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 SORBS2O94875 1100 aaKnown RBP12.23□□□□□ -0.45
CDH5-208ENST00000614547 ARL1P40616 181 aaPredicted RBP12.23□□□□□ -0.45
CDH5-208ENST00000614547 DGKZQ13574 1117 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 SLC26A11Q86WA9 606 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 CPT1BQ92523 772 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 CDKL2Q92772 493 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 DTNBP1Q96EV8 351 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 MTMR12Q9C0I1 747 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 ZNF408Q9H9D4 720 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 FBXO40Q9UH90 709 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 RNASEH1O60930 286 aaKnown RBP12.23□□□□□ -0.45
CDH5-208ENST00000614547 CDH8P55286 799 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 TAF5Q15542 800 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 TKFCQ3LXA3 575 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 CC2D2BQ6DHV5 1058 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 EME1Q96AY2 570 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 MARK4Q96L34 752 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 NLRP4Q96MN2 994 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 CCT7Q99832 543 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 SEMA6AQ9H2E6 1030 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 SUDS3Q9H7L9 328 aaPredicted RBP12.23□□□□□ -0.45
CDH5-208ENST00000614547 KRT82Q9NSB4 513 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 IGLV3-22A0A075B6J6 115 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 A0A0B4J269 797 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 A8MXQ7 604 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 E5RJQ4 531 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 TMEM63AO94886 807 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 ABHD2P08910 425 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 DPEP1P16444 411 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 ADSSP30520 456 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 MYL6P60660 151 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 DLG1Q12959 904 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 ITGA9Q13797 1035 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 DHDDSQ86SQ9 333 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 MASTLQ96GX5 879 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 PANX3Q96QZ0 392 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 SPATA16Q9BXB7 569 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 GLIS2Q9BZE0 524 aaPredicted RBP12.23□□□□□ -0.45
CDH5-208ENST00000614547 RNPEPQ9H4A4 650 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 ACSS3Q9H6R3 686 aa12.23□□□□□ -0.45
CDH5-208ENST00000614547 PHRF1Q9P1Y6 1649 aaKnown RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 NDC80O14777 642 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 MT-CO1P00395 513 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 TNNC2P02585 160 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 IL1R1P14778 569 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 PDGFRAP16234 1089 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 NOMO3P69849 1222 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 TTLL12Q14166 644 aaPredicted RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 FLOT2Q14254 428 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 ZBTB41Q5SVQ8 909 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 RARS2Q5T160 578 aaKnown RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 RNASEH2BQ5TBB1 312 aaKnown RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 TRIM72Q6ZMU5 477 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 CDAN1Q8IWY9 1227 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 OR5B17Q8NGF7 314 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 FAM149B1Q96BN6 582 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 FAM192AQ9GZU8 254 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 DDX56Q9NY93 547 aaKnown RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 KCND2Q9NZV8 630 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 SLC17A6Q9P2U8 582 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 LNPEPQ9UIQ6 1025 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 TDRKHQ9Y2W6 561 aaKnown RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 NR2E3Q9Y5X4 410 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 LAMB4A4D0S4 1761 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 SRGAP2BP0DMP2 458 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 NPR1P16066 1061 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 CIITAP33076 1130 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 CYLC2Q14093 348 aaPredicted RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 SLC15A2Q16348 729 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 ENDOVQ8N8Q3 282 aaKnown RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 MCUQ8NE86 351 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 C20orf96Q9NUD7 363 aaPredicted RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 PNPOQ9NVS9 261 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 NENFQ9UMX5 172 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 NUB1Q9Y5A7 615 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 CSPG5O95196 566 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 GPC3P51654 580 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 PIGHQ14442 188 aaPredicted RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 N4BP2L1Q5TBK1 243 aaPredicted RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 TDRD10Q5VZ19 366 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms