RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 DERAQ9Y315 318 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 MFHAS1Q9Y4C4 1052 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 A0A0U1RQF3 1178 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 FAM187AA6NFU0 413 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 NRP1O14786 923 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 CAPN9O14815 690 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 FKTNO75072 461 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 DDHD2O94830 711 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 GAS8O95995 478 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ATF2P15336 505 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 HSPA6P17066 643 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 TKTL1P51854 596 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ZNF143P52747 638 aaPredicted RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 PMS2P54278 862 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 BST2Q10589 180 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 KYNUQ16719 465 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 CCDC38Q502W7 563 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 PKDCCQ504Y2 493 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 DEFB106AQ8N104 65 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 SIX6OS1Q8N1H7 587 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 FAM71DQ8N9W8 422 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 DBF4BQ8NFT6 615 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 FAM71BQ8TC56 605 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 HHIPL1Q96JK4 782 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 TNIP3Q96KP6 325 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 TBCBQ99426 244 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 CNPY3Q9BT09 278 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 SLC4A5Q9BY07 1137 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ULBP1Q9BZM6 244 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 RNF208Q9H0X6 261 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 TMLHEQ9NVH6 421 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 WDR35Q9P2L0 1181 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 NAALADL1Q9UQQ1 740 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 H7C0C1 242 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 LIASO43766 372 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 CREB3O43889 395 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 SOAT2O75908 522 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 STAU1O95793 577 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 KRT7P08729 469 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 CAPN2P17655 700 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 TNFRSF8P28908 595 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 HSPA9P38646 679 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 PNPLA4P41247 253 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 GABRB2P47870 512 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 ATP5OP48047 213 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 FNTAP49354 379 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 BCAT1P54687 386 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 HDAC4P56524 1084 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 TAP1Q03518 808 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 PTK7Q13308 1070 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 IRF5Q13568 498 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 PCBP1Q15365 356 aaKnown RBP eCLIP3.59□□□□□ -1.83
LIG4-205ENST00000614526 SMAD1Q15797 465 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 CCNG2Q16589 344 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 CYP1B1Q16678 543 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 UPP1Q16831 310 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 XKR4Q5GH76 650 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 MAP3K21Q5TCX8 1036 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 IZUMO3Q5VZ72 239 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 CLEC20AQ6ZU45 233 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 TMEM110Q86TL2 294 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 LRRTM3Q86VH5 581 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 UNC93AQ86WB7 457 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 ECHDC2Q86YB7 292 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 SCN4BQ8IWT1 228 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 UNC45BQ8IWX7 931 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 CRYBG2Q8N1P7 616 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 CCDC185Q8N715 623 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 SCAMP5Q8TAC9 235 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 SPATA18Q8TC71 538 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 LRRC45Q96CN5 670 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 SNRNP25Q9BV90 132 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 CEP41Q9BYV8 373 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 FAM107BQ9H098 131 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 VIPAS39Q9H9C1 493 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 SLC38A7Q9NVC3 462 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 GDAP2Q9NXN4 497 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 MTRF1LQ9UGC7 380 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 TBK1Q9UHD2 729 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 KIAA1257Q9ULG3 409 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 NOVA2Q9UNW9 492 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 SNX10Q9Y5X0 201 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 TTC3P53804 2025 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 GOLGA6L10A6NI86 522 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 C3orf70A6NLC5 250 aaPredicted RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 YJEFN3A6XGL0 299 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 KBTBD13C9JR72 458 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 E7ENQ6 273 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 M0QYT0 321 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 TP73O15350 636 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 FAM200BP0CF97 657 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 RBP3P10745 1247 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 NCAM1P13591 858 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 NPR3P17342 541 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 AMPD1P23109 780 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 CYP2F1P24903 491 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 MAN1A1P33908 653 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 SULT1E1P49888 294 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms