RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 ZACNQ401N2 412 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 CEP135Q66GS9 1140 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 C11orf74Q86VG3 221 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 RPLP0P6Q8NHW5 317 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 DDX1Q92499 740 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 FBXO32Q969P5 355 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 GZF1Q9H116 711 aaPredicted RBP12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 DPEP3Q9H4B8 488 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 FBXO44Q9H4M3 255 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 CHMP5Q9NZZ3 219 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 EBF1Q9UH73 591 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 TRAF3IP3Q9Y228 551 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 NME7Q9Y5B8 376 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 PCDHGA5Q9Y5G8 931 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 CPQQ9Y646 472 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 ABCA7Q8IZY2 2146 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 MYOFQ9NZM1 2061 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 NUP205Q92621 2012 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 E2F8A0AVK6 867 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 CLDN5O00501 218 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 RHOBTB3O94955 611 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 ADH1CP00326 375 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 KRT13P13646 458 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 KCNA4P22459 653 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 RPL13P26373 211 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 CASP4P49662 377 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 MRPS21P82921 87 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 IFRD2Q12894 506 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 DMC1Q14565 340 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 SF3A2Q15428 464 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 HSF5Q4G112 596 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 HECTD3Q5T447 861 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 SNX30Q5VWJ9 437 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 NAIF1Q69YI7 327 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 NUDT18Q6ZVK8 323 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 INTS8Q75QN2 995 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 FILIP1Q7Z7B0 1213 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 FAM35AQ86V20 835 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 ADGRG2Q8IZP9 1017 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 C12orf50Q8NA57 414 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 CCDC150Q8NCX0 1101 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 PLEKHO2Q8TD55 490 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 ZC3H10Q96K80 434 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 DUSP9Q99956 384 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 RNF38Q9H0F5 515 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 LINC00597Q9H2U6 94 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 RXFP3Q9NSD7 469 aa12.88□□□□□ -0.35
PDLIM2-218ENST00000614502 AP1G2O75843 785 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 RHOBTB1O94844 696 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 EPN2O95208 641 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 APODP05090 189 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 PIK3CAP42336 1068 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 VAMP7P51809 220 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 NDUFA8P51970 172 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 SLC5A3P53794 718 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 CDH8P55286 799 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 GOLGA8FQ08AF8 430 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 GOLGA8DPQ0D2H9 430 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 DHCR24Q15392 516 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 ELF2Q15723 593 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 SCARA5Q6ZMJ2 495 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 SV2AQ7L0J3 742 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 CRYBG2Q8N1P7 616 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 PNKPQ96T60 521 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 NACA2Q9H009 215 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 GOLPH3LQ9H4A5 285 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 SMOC1Q9H4F8 434 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 CYP3A43Q9HB55 503 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 FBRSL1Q9HCM7 1045 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 IL37Q9NZH6 218 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 CFAP97Q9P2B7 532 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 SH3BP1Q9Y3L3 701 aa12.87□□□□□ -0.35
PDLIM2-218ENST00000614502 FRYQ5TBA9 3013 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 ZFHX4Q86UP3 3567 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 FAM92AA1XBS5 289 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 ALDH1A2O94788 518 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 VNN1O95497 513 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 ASS1P00966 412 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 CYP17A1P05093 508 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 ZNF806P0C7X5 589 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 NR2F2P24468 414 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 OPRD1P41143 372 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 NDST1P52848 882 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 LIMK1P53667 647 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 CACNA2D1P54289 1103 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 ZXDBP98169 803 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 GAD2Q05329 585 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 AASDHQ4L235 1098 aaPredicted RBP12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 USP39Q53GS9 565 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 BTBD8Q5XKL5 378 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 ACOT1Q86TX2 421 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 KBTBD6Q86V97 674 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 GUF1Q8N442 669 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 TTC39CQ8N584 583 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 TSTD1Q8NFU3 115 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 USP33Q8TEY7 942 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 FAXDC2Q96IV6 333 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms