RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 NKX1-2Q9UD57 310 aaPredicted RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 SNX24Q9Y343 169 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 SCN5AQ14524 2016 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 H0Y3Z8 333 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 ITGB1P05556 798 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 CCNB1P14635 433 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 SP100P23497 879 aaPredicted RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 GATMP50440 423 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 NDST1P52848 882 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 RAD23BP54727 409 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 RPL7AP62424 266 aaKnown RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 FBXO47Q5MNV8 452 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 TAF2Q6P1X5 1199 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 TMEM154Q6P9G4 183 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 ACOT1Q86TX2 421 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 RBM12BQ8IXT5 1001 aaKnown RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 UBR7Q8N806 425 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 LRRC57Q8N9N7 239 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 CTNNBL1Q8WYA6 563 aaPredicted RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 ACSF2Q96CM8 615 aaPredicted RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 RAB3IPQ96QF0 476 aaPredicted RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.42□□□□□ -0.742e-7■■□□□ 14.2
GGA3-221ENST00000614198 RXFP1Q9HBX9 757 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 FAM105AQ9NUU6 356 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 M0QZ92 97 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 AGTP01019 485 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 UNGP13051 313 aaPredicted RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 ACADSP16219 412 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 ATF7P17544 494 aaPredicted RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 PEX5P50542 639 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 SCNN1BP51168 640 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 CLCNKBP51801 687 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 CCL23P55773 120 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 RAB6CQ53S08 254 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 SLC4A11Q8NBS3 891 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 PXYLP1Q8TE99 480 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 CCDC97Q96F63 343 aaPredicted RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 IFT43Q96FT9 208 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 PIWIL1Q96J94 861 aaKnown RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 NUP85Q9BW27 656 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 CFHR5Q9BXR6 569 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 RAB6CQ9H0N0 254 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 EPB41L4BQ9H329 900 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 PCMTD2Q9NV79 361 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 CEP290O15078 2479 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 BTNL10A8MVZ5 291 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 IL18RAPO95256 599 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 FGGP02679 453 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 SETSIPP0DME0 302 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 PBX3P40426 434 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 YARSP54577 528 aaKnown RBP10.41□□□□□ -0.74
GGA3-221ENST00000614198 SESN3P58005 492 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 PSMC1P62191 440 aaKnown RBP10.41□□□□□ -0.74
GGA3-221ENST00000614198 GPNMBQ14956 572 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 ZBTB6Q15916 424 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 CLEC16AQ2KHT3 1053 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 TRIM71Q2Q1W2 868 aaKnown RBP10.41□□□□□ -0.74
GGA3-221ENST00000614198 C9orf57Q5W0N0 161 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 MYLK4Q86YV6 388 aaPredicted RBP10.41□□□□□ -0.74
GGA3-221ENST00000614198 PCSK9Q8NBP7 692 aaKnown RBP10.41□□□□□ -0.74
GGA3-221ENST00000614198 GDAP1Q8TB36 358 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 TRAPPC9Q96Q05 1148 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 VCXQ9H320 206 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 ARL2BPQ9Y2Y0 163 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 NR2E1Q9Y466 385 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 ARL5CA6NH57 179 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 CNGA2Q16280 664 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 SOWAHAQ2M3V2 549 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 DCAF12L1Q5VU92 463 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 OR52E8Q6IFG1 317 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 TRAF7Q6Q0C0 670 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 CTU1Q7Z7A3 348 aaKnown RBP10.41□□□□□ -0.74
GGA3-221ENST00000614198 CROCCP2Q86T23 111 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 STK32AQ8WU08 396 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 HEXIM2Q96MH2 286 aaKnown RBP10.41□□□□□ -0.74
GGA3-221ENST00000614198 RPS6KC1Q96S38 1066 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 BEGAINQ9BUH8 593 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 PABPC3Q9H361 631 aaKnown RBP10.41□□□□□ -0.74
GGA3-221ENST00000614198 KLHL11Q9NVR0 708 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 ZMYND8Q9ULU4 1186 aaPredicted RBP10.41□□□□□ -0.74
GGA3-221ENST00000614198 TRIM33Q9UPN9 1127 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 PTPN22Q9Y2R2 807 aa10.41□□□□□ -0.74
GGA3-221ENST00000614198 GRAP2O75791 330 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 CCL5P13501 91 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 RGS7P49802 495 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 IFI35P80217 286 aaPredicted RBP10.4□□□□□ -0.74
GGA3-221ENST00000614198 PARP6Q2NL67 630 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 C6orf118Q5T5N4 469 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 NDRG1Q92597 394 aaKnown RBP10.4□□□□□ -0.74
GGA3-221ENST00000614198 ASB7Q9H672 318 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 SUDS3Q9H7L9 328 aaPredicted RBP10.4□□□□□ -0.74
GGA3-221ENST00000614198 ZC3H11AO75152 810 aaKnown RBP eCLIP10.4□□□□□ -0.74
GGA3-221ENST00000614198 TPBGLP0DKB5 382 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 RFX1P22670 979 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 GJC1P36383 396 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 ZNF132P52740 706 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.4□□□□□ -0.74
GGA3-221ENST00000614198 FITM2Q8N6M3 262 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 SLAIN1Q8ND83 568 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 LINC01599Q8WXQ3 324 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms