RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ZNF653Q96CK0 615 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 ECSITQ9BQ95 431 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 GPAMQ9HCL2 828 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 NRBP2Q9NSY0 501 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 TAS2R1Q9NYW7 299 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 SMIM31A0A1B0GVY4 71 aa22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 SGPL1O95470 568 aa22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 UBTFL6P0CB48 400 aaPredicted RBP22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 RTP1P59025 263 aa22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 C6orf163Q5TEZ5 329 aa22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 ALKBH8Q96BT7 664 aaKnown RBP22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 PLEKHG4BQ96PX9 1271 aa22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 MTG1Q9BT17 334 aaPredicted RBP22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 METTL5Q9NRN9 209 aaKnown RBP22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 AGPAT3Q9NRZ7 376 aa22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 ZDHHC7Q9NXF8 308 aa22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 PSMC3IPQ9P2W1 217 aaPredicted RBP22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 HEY2Q9UBP5 337 aa22.89■■□□□ 1.26
POLR2J3-220ENST00000613744 PMM2O15305 246 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 ATP9BO43861 1147 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 CYP1A1P04798 512 aaPredicted RBP22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 GJB1P08034 283 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 TRIM49P0CI25 452 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 TRIM49CP0CI26 452 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 ESRRAP11474 423 aaPredicted RBP22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 ZC2HC1CQ53FD0 456 aaPredicted RBP22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 PLEKHG4Q58EX7 1191 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 ACAD11Q709F0 780 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 PHLDB2Q86SQ0 1253 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 WDR60Q8WVS4 1066 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 CYP26B1Q9NR63 512 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 ANKEF1Q9NU02 776 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 DNAAF2Q9NVR5 837 aaKnown RBP22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 OGDHLQ9ULD0 1010 aa22.89■■□□□ 1.25
POLR2J3-220ENST00000613744 CFAP69A5D8W1 941 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 INSRRP14616 1297 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 ARFIP2P53365 341 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 AP2B1P63010 937 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 THOC5Q13769 683 aaKnown RBP22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 ITGA9Q13797 1035 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 COL13A1Q5TAT6 717 aaPredicted RBP22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 FAM71AQ8IYT1 594 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 PIP4K2CQ8TBX8 421 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 CCDC110Q8TBZ0 833 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 TMEM174Q8WUU8 243 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 PPP1R14BQ96C90 147 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 FAM81BQ96LP2 452 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 SETD4Q9NVD3 440 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 KBTBD13C9JR72 458 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 CCDC166P0CW27 439 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 ANPEPP15144 967 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 PGM1P36871 562 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 SLC26A2P50443 739 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 SOX10P56693 466 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 TRIP13Q15645 432 aaPredicted RBP22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 EPC2Q52LR7 807 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 RINLQ6ZS11 566 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 DTX3LQ8TDB6 740 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 ATG4AQ8WYN0 398 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 SSX2IPQ9Y2D8 614 aa22.88■■□□□ 1.25
POLR2J3-220ENST00000613744 ZBTB42B2RXF5 422 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 KLRC2P26717 231 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 ADSSP30520 456 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 MYLK4Q86YV6 388 aaPredicted RBP22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 TMPRSS6Q8IU80 811 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 NAT14Q8WUY8 206 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 HIC2Q96JB3 615 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 FAM167AQ96KS9 214 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 PWWP2AQ96N64 755 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 TUBGCP5Q96RT8 1024 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 FNBP1Q96RU3 617 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 PARVGQ9HBI0 331 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 NDE1Q9NXR1 346 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 POLIQ9UNA4 740 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 NUMBLQ9Y6R0 609 aa22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 KIAA0100Q14667 2235 aaKnown RBP22.87■■□□□ 1.25
POLR2J3-220ENST00000613744 HAS3O00219 553 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 HBP1O60381 514 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 KPNA6O60684 536 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 SMIM10L2AP0DMW4 78 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 SMIM10L2BP0DMW5 78 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 XIAPP98170 497 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 SFSWAPQ12872 951 aaKnown RBP22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 KLF1Q13351 362 aaPredicted RBP22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 HIC1Q14526 733 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 MAPK6Q16659 721 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 FAM47CQ5HY64 1035 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 IZUMO2Q6UXV1 221 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 C4orf33Q8N1A6 199 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 MYCT1Q8N699 235 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 RFWD2Q8NHY2 731 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 IRGQQ8WZA9 623 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 TMEM106CQ9BVX2 250 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 NIFKQ9BYG3 293 aaKnown RBP22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 PHACTR1Q9C0D0 580 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 SAYSD1Q9NPB0 183 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 GPRC5CQ9NQ84 441 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 GALNT8Q9NY28 637 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 KCND2Q9NZV8 630 aa22.86■■□□□ 1.25
POLR2J3-220ENST00000613744 A0A1W2PQ45 241 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms