RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ASIC2Q16515 512 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 SFMBT2Q5VUG0 894 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 TAF3Q5VWG9 929 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 PMF1Q6P1K2 205 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 PASD1Q8IV76 773 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 CMTM8Q8IZV2 173 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 MAB21L3Q8N8X9 362 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 MSANTD4Q8NCY6 345 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 IPO4Q8TEX9 1081 aaKnown RBP13.96□□□□□ -0.17
MDC1-209ENST00000613547 BAP1Q92560 729 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 GOLGA1Q92805 767 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 SMARCD2Q92925 531 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 TTYH3Q9C0H2 523 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 NACA2Q9H009 215 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 SYNCQ9H7C4 482 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 CYLDQ9NQC7 956 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 GMIPQ9P107 970 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 LIMD1Q9UGP4 676 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 LUC7L2Q9Y383 392 aaKnown RBP13.96□□□□□ -0.17
MDC1-209ENST00000613547 USP3Q9Y6I4 520 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 TULP2O00295 520 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 TADA3O75528 432 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 CKMP06732 381 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 RALAP11233 206 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 LCP1P13796 627 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 WEE1P30291 646 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 TUBP50607 506 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 ZBED6P86452 979 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 CDR2Q01850 454 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 PDCLQ13371 301 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 FAM78AQ5JUQ0 283 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 HECTD3Q5T447 861 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 STXBP5Q5T5C0 1151 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 SNX30Q5VWJ9 437 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 TXNDC8Q6A555 127 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 PM20D1Q6GTS8 502 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 TRIM72Q6ZMU5 477 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 TADA2BQ86TJ2 420 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 NOP9Q86U38 636 aaKnown RBP13.95□□□□□ -0.18
MDC1-209ENST00000613547 VSTM4Q8IW00 320 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 SCML4Q8N228 414 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 ASB16Q96NS5 453 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 NECAB3Q96P71 396 aaPredicted RBP13.95□□□□□ -0.18
MDC1-209ENST00000613547 CDK5RAP1Q96SZ6 601 aaKnown RBP13.95□□□□□ -0.18
MDC1-209ENST00000613547 SLC46A2Q9BY10 475 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 ULBP1Q9BZM6 244 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 MIS12Q9H081 205 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 KIF9Q9HAQ2 790 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 TRPV4Q9HBA0 871 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 ZFP14Q9HCL3 533 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 CNGB3Q9NQW8 809 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 CLIC5Q9NZA1 410 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 CHORDC1Q9UHD1 332 aaPredicted RBP13.95□□□□□ -0.18
MDC1-209ENST00000613547 NAGPAQ9UK23 515 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 NOCTQ9UK39 431 aaKnown RBP13.95□□□□□ -0.18
MDC1-209ENST00000613547 CAPN11Q9UMQ6 739 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 XIRP2A4UGR9 3374 aa13.95□□□□□ -0.18
MDC1-209ENST00000613547 PRUNE2Q8WUY3 3088 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 ANHXE9PGG2 379 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 NRG2O14511 850 aaPredicted RBP13.94□□□□□ -0.18
MDC1-209ENST00000613547 ECI2O75521 394 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 CFHP08603 1231 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 HDCP19113 662 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 HTR4Q13639 388 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 RNF135Q8IUD6 432 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 GPIHBP1Q8IV16 184 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 ARID3BQ8IVW6 561 aaPredicted RBP13.94□□□□□ -0.18
MDC1-209ENST00000613547 CELF5Q8N6W0 485 aaKnown RBP13.94□□□□□ -0.18
MDC1-209ENST00000613547 C1orf131Q8NDD1 294 aaKnown RBP13.94□□□□□ -0.18
MDC1-209ENST00000613547 CPLX3Q8WVH0 158 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 IRGQQ8WZA9 623 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 DDX1Q92499 740 aaKnown RBP13.94□□□□□ -0.18
MDC1-209ENST00000613547 PPP1R13BQ96KQ4 1090 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 ZSWIM3Q96MP5 696 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 TRIM62Q9BVG3 475 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 SLC4A5Q9BY07 1137 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 KCNK12Q9HB15 430 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 SEPT11Q9NVA2 429 aaKnown RBP13.94□□□□□ -0.18
MDC1-209ENST00000613547 NUMBLQ9Y6R0 609 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 C2orf16Q68DN1 1984 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 PTPRDP23468 1912 aa13.94□□□□□ -0.18
MDC1-209ENST00000613547 DENND4AQ7Z401 1863 aa13.93□□□□□ -0.18
MDC1-209ENST00000613547 A0A1W2PQH9 124 aa13.93□□□□□ -0.18
MDC1-209ENST00000613547 C2orf78A6NCI8 922 aa13.93□□□□□ -0.18
MDC1-209ENST00000613547 TLR5O60602 858 aa13.93□□□□□ -0.18
MDC1-209ENST00000613547 OAS1P00973 400 aaKnown RBP13.93□□□□□ -0.18
MDC1-209ENST00000613547 GYPCP04921 128 aa13.93□□□□□ -0.18
MDC1-209ENST00000613547 MMEP08473 750 aa13.93□□□□□ -0.18
MDC1-209ENST00000613547 ZDHHC11BP0C7U3 371 aa13.93□□□□□ -0.18
MDC1-209ENST00000613547 CDH5P33151 784 aaPredicted RBP13.93□□□□□ -0.18
MDC1-209ENST00000613547 RPL34P49207 117 aaKnown RBP13.93□□□□□ -0.18
MDC1-209ENST00000613547 YWHAGP61981 247 aaKnown RBP eCLIP13.93□□□□□ -0.18
MDC1-209ENST00000613547 KLHL30Q0D2K2 578 aa13.93□□□□□ -0.18
MDC1-209ENST00000613547 TSR1Q2NL82 804 aaKnown RBP13.93□□□□□ -0.18
MDC1-209ENST00000613547 PARM1Q6UWI2 310 aa13.93□□□□□ -0.18
MDC1-209ENST00000613547 RSRC2Q7L4I2 434 aaKnown RBP13.93□□□□□ -0.18
MDC1-209ENST00000613547 TMEM110Q86TL2 294 aa13.93□□□□□ -0.18
MDC1-209ENST00000613547 ARL14EPQ8N8R7 260 aaPredicted RBP13.93□□□□□ -0.18
MDC1-209ENST00000613547 RNF139Q8WU17 664 aa13.93□□□□□ -0.18
MDC1-209ENST00000613547 SLC20A1Q8WUM9 679 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms