RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 SMC1AQ14683 1233 aaKnown RBP12.89□□□□□ -0.35
CBWD1-220ENST00000612045 SIX1Q15475 284 aaPredicted RBP12.89□□□□□ -0.35
CBWD1-220ENST00000612045 PPP2R5EQ16537 467 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 SMTNL2Q2TAL5 461 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 KCNT1Q5JUK3 1230 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 ANKS1BQ7Z6G8 1248 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 CEP57Q86XR8 500 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 SPATA2LQ8IUW3 424 aaPredicted RBP12.89□□□□□ -0.35
CBWD1-220ENST00000612045 DCP1BQ8IZD4 617 aaKnown RBP12.89□□□□□ -0.35
CBWD1-220ENST00000612045 PRELID2Q8N945 189 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 FAM172AQ8WUF8 416 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 RAPGEF5Q92565 580 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 NDRG1Q92597 394 aaKnown RBP12.89□□□□□ -0.35
CBWD1-220ENST00000612045 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
CBWD1-220ENST00000612045 ACSF2Q96CM8 615 aaPredicted RBP12.89□□□□□ -0.35
CBWD1-220ENST00000612045 B3GALT6Q96L58 329 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 SLITRK1Q96PX8 696 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 HERPUD2Q9BSE4 406 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 DDX23Q9BUQ8 820 aaKnown RBP12.89□□□□□ -0.35
CBWD1-220ENST00000612045 OSBPL8Q9BZF1 889 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 ULBP1Q9BZM6 244 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 CWH43Q9H720 699 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 STIM2Q9P246 746 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 PCDH10Q9P2E7 1040 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 NLRC5Q86WI3 1866 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 PTPRDP23468 1912 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 COL4A6Q14031 1691 aa12.89□□□□□ -0.35
CBWD1-220ENST00000612045 PHF2O75151 1096 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 GLI1P08151 1106 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 RARAP10276 462 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 DESP17661 470 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 MCM3P25205 808 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 CETN2P41208 172 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 WDR5P61964 334 aaKnown RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 YWHAZP63104 245 aaKnown RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 DEFB103AP81534 67 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 BRD3Q15059 726 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 CTXN3Q4LDR2 81 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 RAB6CQ53S08 254 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 ODF2Q5BJF6 829 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 ZNF280DQ6N043 979 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 MFSD7Q6UXD7 560 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 TMCO2Q7Z6W1 182 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 BCL7CQ8WUZ0 217 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 MAIP1Q8WWC4 291 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 RUBCNQ92622 972 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 CENPIQ92674 756 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 FAM149B1Q96BN6 582 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 ZNF689Q96CS4 500 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 C11orf84Q9BUA3 381 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 HEMGNQ9BXL5 484 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 RAB6CQ9H0N0 254 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 SLITRK6Q9H5Y7 841 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 PNPLA8Q9NP80 782 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 CNGB3Q9NQW8 809 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 CCDC151A5D8V7 595 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 OR6C75A6NL08 312 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 PRPSAP2O60256 369 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 ZMYND10O75800 440 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 CYP2F1P24903 491 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 MATKP42679 507 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 CLCN6P51797 869 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 DAOAP59103 153 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 COPS2P61201 443 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 RBM10P98175 930 aaKnown RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 KLF1Q13351 362 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 NFE2Q16621 373 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 CYP1B1Q16678 543 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 RTP2Q5QGT7 225 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 FAM117BQ6P1L5 589 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 TAS1R1Q7RTX1 841 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 CCDC26Q8TAB7 109 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 PEBP4Q96S96 227 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 NCAPGQ9BPX3 1015 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 HINFPQ9BQA5 517 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 RC3H2Q9HBD1 1191 aaKnown RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
CBWD1-220ENST00000612045 AMACRQ9UHK6 382 aa12.88□□□□□ -0.35
CBWD1-220ENST00000612045 LRRD1A4D1F6 860 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 C3orf70A6NLC5 250 aaPredicted RBP12.87□□□□□ -0.35
CBWD1-220ENST00000612045 DAB1O75553 588 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 BAIAP3O94812 1187 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 HEXIM1O94992 359 aaKnown RBP12.87□□□□□ -0.35
CBWD1-220ENST00000612045 ZBED1O96006 694 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 USP17L7P0C7H9 530 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 TFE3P19532 575 aaPredicted RBP12.87□□□□□ -0.35
CBWD1-220ENST00000612045 CHRNA3P32297 505 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 PTPN7P35236 360 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 GRIK1P39086 918 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 HDAC4P56524 1084 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 SPOCD1Q6ZMY3 1216 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 CYP4V2Q6ZWL3 525 aaPredicted RBP12.87□□□□□ -0.35
CBWD1-220ENST00000612045 MAATS1Q7Z4T9 603 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 DEFB106AQ8N104 65 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 C12orf50Q8NA57 414 aaPredicted RBP12.87□□□□□ -0.35
CBWD1-220ENST00000612045 CMASQ8NFW8 434 aaPredicted RBP12.87□□□□□ -0.35
CBWD1-220ENST00000612045 MAGOHBQ96A72 148 aaKnown RBP12.87□□□□□ -0.35
CBWD1-220ENST00000612045 FUBP3Q96I24 572 aaKnown RBP eCLIP12.87□□□□□ -0.35
CBWD1-220ENST00000612045 SLC2A13Q96QE2 648 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms