RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 CLUL1Q15846 466 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 FAM209AQ5JX71 171 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 MFSD7Q6UXD7 560 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 ZBED8Q8IZ13 594 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 SGCDQ92629 289 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 PITPNM3Q9BZ71 974 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 DMAP1Q9NPF5 467 aaPredicted RBP11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 A0A1W2PPM1 405 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 ABLIM1O14639 778 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 DIAPH2O60879 1101 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 ANP32DO95626 131 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 EDN1P05305 212 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 SKIP12755 728 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 MAGEA4P43358 317 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 POLE2P56282 527 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 WDR4P57081 412 aaKnown RBP11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 USP46P62068 366 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 SREBF2Q12772 1141 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 PTK6Q13882 451 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 SLC44A4Q53GD3 710 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 NBPF12Q5TAG4 269 aaPredicted RBP11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 MFSD5Q6N075 450 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 FBXO46Q6PJ61 603 aaPredicted RBP11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 DPH6Q7L8W6 267 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 EEPD1Q7L9B9 569 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 REPS2Q8NFH8 660 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 SERPINB12Q96P63 405 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 TCF12Q99081 682 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 ETNK1Q9HBU6 452 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 PDLIM7Q9NR12 457 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 TJP2Q9UDY2 1190 aa11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 NOSIPQ9Y314 301 aaKnown RBP11.17□□□□□ -0.62
PCDHGC3-202ENST00000611950 HTTP42858 3142 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 ARID2Q68CP9 1835 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 PIK3R2O00459 728 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 PROSCO94903 275 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 VNN1O95497 513 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 HNRNPCP07910 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 GHRP10912 638 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 CCND2P30279 289 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 GBP1P32455 592 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 TM4SF4P48230 202 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 POLGP54098 1239 aaPredicted RBP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 GEMIN4P57678 1058 aaKnown RBP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 OVGP1Q12889 678 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 BNIP1Q12981 228 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 ZBTB17Q13105 803 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 MAMLD1Q13495 774 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 SNRNP48Q6IEG0 339 aaKnown RBP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 ZNF554Q86TJ5 538 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 ECHDC2Q86YB7 292 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 C12orf50Q8NA57 414 aaPredicted RBP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 ANKLE1Q8NAG6 615 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 RBBP8NLQ8NC74 664 aaPredicted RBP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 LRRN4Q8WUT4 740 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 CKAP2Q8WWK9 683 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 ZNF75CPQ92670 426 aaPredicted RBP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 GPRASP2Q96D09 838 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 OSBPL1AQ9BXW6 950 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 R3HDMLQ9H3Y0 253 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 FBXO40Q9UH90 709 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 XPO7Q9UIA9 1087 aaKnown RBP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 AGO2Q9UKV8 859 aaKnown RBP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 PCDHB2Q9Y5E7 798 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 COL11A1P12107 1806 aaPredicted RBP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 SPDYE5A6NIY4 337 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 SGK1O00141 431 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 FKTNO75072 461 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 WEE2P0C1S8 567 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 TNFSF9P41273 254 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 COPS2P61201 443 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 TNFAIP8L3Q5GJ75 292 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 C15orf39Q6ZRI6 1047 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 CEP128Q6ZU80 1094 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 MON1BQ7L1V2 547 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 FAM20CQ8IXL6 584 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 RDM1Q8NG50 284 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 TRPC4APQ8TEL6 797 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 RBAKQ9NYW8 714 aaPredicted RBP11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 KLHL14Q9P2G3 628 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 HAO1Q9UJM8 370 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 GRID1Q9ULK0 1009 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 NEU2Q9Y3R4 380 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 RLFQ13129 1914 aa11.16□□□□□ -0.62
PCDHGC3-202ENST00000611950 A0A1W2PQ67 120 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 MAP3K6O95382 1288 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 CA4P22748 312 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 GTF2H1P32780 548 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 RPA3P35244 121 aaPredicted RBP11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 BACE1P56817 501 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 GCNT1Q02742 428 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 SULT2A1Q06520 285 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 TNFAIP1Q13829 316 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 CCDC153Q494R4 210 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 DCUN1D2Q6PH85 259 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 CRELD2Q6UXH1 353 aaPredicted RBP11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 VSIG1Q86XK7 387 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 RHOT1Q8IXI2 618 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 TEX9Q8N6V9 391 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms