RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 NCKAP1LP55160 1127 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 PDE1BQ01064 536 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 BST1Q10588 318 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 ORC1Q13415 861 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 HIC1Q14526 733 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 PRKD1Q15139 912 aaPredicted RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 RALGPS1Q5JS13 557 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 KLHDC10Q6PID8 442 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 C1orf228Q6PIY5 440 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 ANO5Q75V66 913 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 MAP4K3Q8IVH8 894 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 TRIM11Q96F44 468 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 PRMT6Q96LA8 375 aaPredicted RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 CNBD2Q96M20 576 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 MFSD14AQ96MC6 490 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 MMP19Q99542 508 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 RIT2Q99578 217 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 VPS11Q9H270 941 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 EHMT1Q9H9B1 1298 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 ADAMTS6Q9UKP5 1117 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 FAF1Q9UNN5 650 aaPredicted RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 SHOC2Q9UQ13 582 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 NUB1Q9Y5A7 615 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 TCRBV9S1A1TA0A576 114 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 TRIM49D1C9J1S8 452 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 I3L4J1 428 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 C6orf222P0C671 652 aaPredicted RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 CHN2P52757 468 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 SFSWAPQ12872 951 aaKnown RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 CHI3L2Q15782 390 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 NADK2Q4G0N4 442 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 KCTD21Q4G0X4 260 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 SLC44A4Q53GD3 710 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 TFDP3Q5H9I0 405 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 PLEKHA7Q6IQ23 1121 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 NPNTQ6UXI9 565 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 PDSS2Q86YH6 399 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 AGO4Q9HCK5 861 aaKnown RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 PARVAQ9NVD7 372 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 PAIP2BQ9ULR5 123 aaKnown RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 GREB1LQ9C091 1923 aaPredicted RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 LOC100653049A0A140TA62 436 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 F5H423 210 aaPredicted RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 COPEO14579 308 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 KRT34O76011 436 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 VNN1O95497 513 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 CCDC166P0CW27 439 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 CDKN2BP42772 138 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 RAP1GDS1P52306 607 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 ATXN3P54252 364 aaPredicted RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 FOLH1Q04609 750 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 MSLNQ13421 630 aaPredicted RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 CUL2Q13617 745 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 SH3D19Q5HYK7 790 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 SP8Q8IXZ3 490 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 PDIK1LQ8N165 341 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 CCDC33Q8N5R6 958 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 ICA1LQ8NDH6 482 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 OR5B17Q8NGF7 314 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 SRPK1Q96SB4 655 aaKnown RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 FOXP3Q9BZS1 431 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 C20orf27Q9GZN8 174 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 LIN28AQ9H9Z2 209 aaKnown RBP11.48□□□□□ -0.57
CDH4-202ENST00000611855 PCDH9Q9HC56 1237 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 S100A14Q9HCY8 104 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 BTBD7Q9P203 1132 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 IP6K2Q9UHH9 426 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 ZNRF3Q9ULT6 936 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 PCDHGB4Q9UN71 923 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 PCDHGB5Q9Y5G0 923 aa11.48□□□□□ -0.57
CDH4-202ENST00000611855 RBBP6Q7Z6E9 1792 aaKnown RBP11.47□□□□□ -0.57
CDH4-202ENST00000611855 SMIM31A0A1B0GVY4 71 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 F8W8V4 182 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 BUD23O43709 281 aaKnown RBP11.47□□□□□ -0.57
CDH4-202ENST00000611855 MAGEC1O60732 1142 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 ACO1P21399 889 aaKnown RBP11.47□□□□□ -0.57
CDH4-202ENST00000611855 PCSK6P29122 969 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 PMLP29590 882 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 LIG4P49917 911 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 SLC18A1P54219 525 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 SH3BGRP55822 239 aaPredicted RBP11.47□□□□□ -0.57
CDH4-202ENST00000611855 PTP4A2Q12974 167 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 PPIL6Q8IXY8 311 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 TMEM130Q8N3G9 435 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 KCTD17Q8N5Z5 321 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 ZNF606Q8WXB4 792 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 HSPH1Q92598 858 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 TAAR1Q96RJ0 339 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 PRPF18Q99633 342 aaKnown RBP11.47□□□□□ -0.57
CDH4-202ENST00000611855 CALN1Q9BXU9 219 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 ZNF541Q9H0D2 1346 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 SIPA1L1O43166 1804 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 E2F8A0AVK6 867 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 CXorf49A8MYA2 514 aaPredicted RBP11.47□□□□□ -0.57
CDH4-202ENST00000611855 PIK3R2O00459 728 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 TM9SF1O15321 606 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 CDK4P11802 303 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 IL1R2P27930 398 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 CCR3P51677 355 aa11.47□□□□□ -0.57
CDH4-202ENST00000611855 KRT72Q14CN4 511 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms