RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 FOXD4L3Q6VB84 417 aaPredicted RBP25.91■■□□□ 1.74
CDKN3-211ENST00000611205 ALLCQ8N6M5 410 aa25.91■■□□□ 1.74
CDKN3-211ENST00000611205 TXNDC5Q8NBS9 432 aaKnown RBP25.91■■□□□ 1.74
CDKN3-211ENST00000611205 GZF1Q9H116 711 aaPredicted RBP25.91■■□□□ 1.74
CDKN3-211ENST00000611205 XYLT2Q9H1B5 865 aa25.91■■□□□ 1.74
CDKN3-211ENST00000611205 SMYD3Q9H7B4 428 aa25.91■■□□□ 1.74
CDKN3-211ENST00000611205 MAGEF1Q9HAY2 307 aa25.91■■□□□ 1.74
CDKN3-211ENST00000611205 ATP8B3O60423 1300 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 ALDH1A2O94788 518 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 KLF8O95600 359 aaPredicted RBP25.9■■□□□ 1.74
CDKN3-211ENST00000611205 ADH5P11766 374 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 HNRNPLP14866 589 aaKnown RBP eCLIP25.9■■□□□ 1.74
CDKN3-211ENST00000611205 AFMP43652 599 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 DHPSP49366 369 aaPredicted RBP25.9■■□□□ 1.74
CDKN3-211ENST00000611205 CDH8P55286 799 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 MESP2Q0VG99 397 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 ZNF699Q32M78 642 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 CYP2U1Q7Z449 544 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 PDZD8Q8NEN9 1154 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 KCNK16Q96T55 309 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 ARHGEF4Q9NR80 690 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 TBC1D14Q9P2M4 693 aa25.9■■□□□ 1.74
CDKN3-211ENST00000611205 CHORDC1Q9UHD1 332 aaPredicted RBP25.9■■□□□ 1.74
CDKN3-211ENST00000611205 TNRC6BQ9UPQ9 1833 aaKnown RBP25.89■■□□□ 1.74
CDKN3-211ENST00000611205 CEP192Q8TEP8 1941 aa25.89■■□□□ 1.74
CDKN3-211ENST00000611205 LNP1A1A4G5 178 aa25.89■■□□□ 1.74
CDKN3-211ENST00000611205 KHNYNO15037 678 aaKnown RBP25.89■■□□□ 1.74
CDKN3-211ENST00000611205 EIF2DP41214 584 aaKnown RBP25.89■■□□□ 1.74
CDKN3-211ENST00000611205 SCARA5Q6ZMJ2 495 aa25.89■■□□□ 1.74
CDKN3-211ENST00000611205 FAM35AQ86V20 835 aa25.89■■□□□ 1.74
CDKN3-211ENST00000611205 C12orf56Q8IXR9 622 aa25.89■■□□□ 1.74
CDKN3-211ENST00000611205 IL17RCQ8NAC3 791 aa25.89■■□□□ 1.74
CDKN3-211ENST00000611205 ZDHHC4Q9NPG8 344 aa25.89■■□□□ 1.74
CDKN3-211ENST00000611205 CGNQ9P2M7 1197 aaKnown RBP25.89■■□□□ 1.74
CDKN3-211ENST00000611205 SH3BP1Q9Y3L3 701 aa25.89■■□□□ 1.74
CDKN3-211ENST00000611205 PATE3B3GLJ2 98 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 SGK1O00141 431 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 COCHO43405 550 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 NOVA1P51513 510 aaKnown RBP25.88■■□□□ 1.73
CDKN3-211ENST00000611205 KNOP1Q1ED39 458 aaKnown RBP25.88■■□□□ 1.73
CDKN3-211ENST00000611205 BMT2Q1RMZ1 405 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 ZNF667Q5HYK9 610 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 LY6G5CQ5SRR4 150 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 HECTD3Q5T447 861 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 EMC10Q5UCC4 262 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 DAB2IPQ5VWQ8 1189 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 SCAMP5Q8TAC9 235 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 PLEKHO2Q8TD55 490 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 RLN3Q8WXF3 142 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 OVCA2Q8WZ82 227 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 ELMO3Q96BJ8 720 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 POLMQ9NP87 494 aaPredicted RBP25.88■■□□□ 1.73
CDKN3-211ENST00000611205 BCCIPQ9P287 314 aaKnown RBP eCLIP25.88■■□□□ 1.73
CDKN3-211ENST00000611205 PLXND1Q9Y4D7 1925 aa25.88■■□□□ 1.73
CDKN3-211ENST00000611205 E2F8A0AVK6 867 aa25.87■■□□□ 1.73
CDKN3-211ENST00000611205 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.87■■□□□ 1.73
CDKN3-211ENST00000611205 SLC5A3P53794 718 aa25.87■■□□□ 1.73
CDKN3-211ENST00000611205 CUL4BQ13620 913 aa25.87■■□□□ 1.73
CDKN3-211ENST00000611205 EOGTQ5NDL2 527 aa25.87■■□□□ 1.73
CDKN3-211ENST00000611205 PIGKQ92643 395 aa25.87■■□□□ 1.73
CDKN3-211ENST00000611205 CCSER2Q9H7U1 834 aa25.87■■□□□ 1.73
CDKN3-211ENST00000611205 DMAP1Q9NPF5 467 aaPredicted RBP25.87■■□□□ 1.73
CDKN3-211ENST00000611205 FAM13BQ9NYF5 915 aa25.87■■□□□ 1.73
CDKN3-211ENST00000611205 PVALEFA0A1B0GWK0 134 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 LRRIQ3A6PVS8 624 aaPredicted RBP25.86■■□□□ 1.73
CDKN3-211ENST00000611205 MAP3K13O43283 966 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 GRIA2P42262 883 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 SHC2P98077 582 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 GAD2Q05329 585 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 HSF5Q4G112 596 aaPredicted RBP25.86■■□□□ 1.73
CDKN3-211ENST00000611205 PGBD3Q8N328 593 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 NAT16Q8N8M0 369 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 OLIG1Q8TAK6 271 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 WHAMMQ8TF30 809 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 SMARCD1Q96GM5 515 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 TNIP3Q96KP6 325 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 ZFRQ96KR1 1074 aaKnown RBP25.86■■□□□ 1.73
CDKN3-211ENST00000611205 SPACA7Q96KW9 195 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 VRTNQ9H8Y1 702 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 TMEM9BQ9NQ34 198 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 GMIPQ9P107 970 aa25.86■■□□□ 1.73
CDKN3-211ENST00000611205 GIPC1O14908 333 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 IRF1P10914 325 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 KIR2DL1P43626 348 aaPredicted RBP25.85■■□□□ 1.73
CDKN3-211ENST00000611205 NCOA4Q13772 614 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 BTBD8Q5XKL5 378 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 PAQR9Q6ZVX9 377 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 ARMCX6Q7L4S7 300 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 GRAMD1CQ8IYS0 662 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 HMGB4Q8WW32 186 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 OTUB2Q96DC9 234 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 NACA2Q9H009 215 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 SDCBP2Q9H190 292 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 PCDHA7Q9UN72 937 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 PI4KAP42356 2102 aa25.85■■□□□ 1.73
CDKN3-211ENST00000611205 TBC1D3BA6NDS4 549 aa25.84■■□□□ 1.73
CDKN3-211ENST00000611205 TNFRSF10BO14763 440 aa25.84■■□□□ 1.73
CDKN3-211ENST00000611205 AP1G2O75843 785 aa25.84■■□□□ 1.73
CDKN3-211ENST00000611205 P2RY2P41231 377 aa25.84■■□□□ 1.73
CDKN3-211ENST00000611205 TNFRSF4P43489 277 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms