RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 GPR75-ASB3A0A0A6YYF3 556 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 GSNP06396 782 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 MUTP22033 750 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 RPL5P46777 297 aaKnown RBP9.45□□□□□ -0.9
COL25A1-208ENST00000610288 CLK1P49759 484 aaKnown RBP9.45□□□□□ -0.9
COL25A1-208ENST00000610288 SCNN1BP51168 640 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 CAPRIN1Q14444 709 aaKnown RBP9.45□□□□□ -0.9
COL25A1-208ENST00000610288 SGSM1Q2NKQ1 1148 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 MIIPQ5JXC2 388 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 SCAIQ8N9R8 606 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 OR6P1Q8NGX9 317 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 CAPSLQ8WWF8 208 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 SLC5A5Q92911 643 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 APOPT1Q96IL0 206 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 SORCS3Q9UPU3 1222 aa9.45□□□□□ -0.9
COL25A1-208ENST00000610288 KANSL1LA0AUZ9 987 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 SLCO1B7G3V0H7 640 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 PSMD3O43242 534 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 TBC1D12O60347 775 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 WDR47O94967 919 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 PSMA4P25789 261 aaKnown RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 NFKBIAP25963 317 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 PKN2Q16513 984 aaKnown RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 KYAT1Q16773 422 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 TAS2R42Q7RTR8 314 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 IFNEQ86WN2 208 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 HEATR4Q86WZ0 1026 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 RNF135Q8IUD6 432 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 MICALL2Q8IY33 904 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 BAP1Q92560 729 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 TSPAN17Q96FV3 270 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 TNIP3Q96KP6 325 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 PHACTR1Q9C0D0 580 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 SPATA7Q9P0W8 599 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 ZNF70Q9UC06 446 aaPredicted RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 SNX13Q9Y5W8 968 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 MAP2P11137 1827 aaKnown RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 ENTPD5O75356 428 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 MED24O75448 989 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 LCP1P13796 627 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 VAV1P15498 845 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 RECQLP46063 649 aaPredicted RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 EPC2Q52LR7 807 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 PLA2G4FQ68DD2 849 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 NET1Q7Z628 596 aaPredicted RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 GIPC3Q8TF64 312 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 SLC16A10Q8TF71 515 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 SEPT1Q8WYJ6 367 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 RMND5BQ96G75 393 aaPredicted RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 OSBPL7Q9BZF2 842 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 SCN3BQ9NY72 215 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 KCNK4Q9NYG8 393 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 TRIM43BA6NCK2 446 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 TMEM191CA6NGB0 347 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 POLRMTO00411 1230 aaKnown RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 ZBTB39O15060 712 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 MFN2O95140 757 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 C4BPBP20851 252 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 RRM1P23921 792 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 HOXD10P28358 340 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 PDK4Q16654 411 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 ZBTB49Q6ZSB9 765 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 FASTKD5Q7L8L6 764 aaKnown RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 SLC20A1Q8WUM9 679 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 AFG1LQ8WV93 481 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 FAM151AQ8WW52 585 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 SLC35C1Q96A29 364 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 DGCR14Q96DF8 476 aaKnown RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 FAR2Q96K12 515 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 EPAS1Q99814 870 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 SPON2Q9BUD6 331 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 APPL1Q9UKG1 709 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 VWDEQ8N2E2 1590 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 USP1O94782 785 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 BCL10O95999 233 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 GTF2H1P32780 548 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 TTKP33981 857 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 CHN2P52757 468 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 VCPP55072 806 aaKnown RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 PTK2BQ14289 1009 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 MXD4Q14582 209 aaPredicted RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 BOLA3Q53S33 107 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 PDPK2PQ6A1A2 396 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 EXOC3L1Q86VI1 746 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 MICU2Q8IYU8 434 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 SLC25A41Q8N5S1 370 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 KYQ8NBH2 561 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 QKIQ96PU8 341 aaKnown RBP eCLIP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 DEPDC7Q96QD5 511 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 RUSC1Q9BVN2 902 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 OLA1Q9NTK5 396 aaKnown RBP9.44□□□□□ -0.9
COL25A1-208ENST00000610288 RRN3Q9NYV6 651 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 FAM8A1Q9UBU6 413 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 SNX9Q9Y5X1 595 aa9.44□□□□□ -0.9
COL25A1-208ENST00000610288 KDM6AO15550 1401 aaPredicted RBP9.43□□□□□ -0.9
COL25A1-208ENST00000610288 KLRC4O43908 158 aa9.43□□□□□ -0.9
COL25A1-208ENST00000610288 SMNDC1O75940 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
COL25A1-208ENST00000610288 S100A9P06702 114 aaKnown RBP9.43□□□□□ -0.9
COL25A1-208ENST00000610288 RALBP11234 206 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms