RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 ZNF197O14709 1029 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 XPO1O14980 1071 aaKnown RBP12.86□□□□□ -0.35
LINC00963-212ENST00000608669 CKMP06732 381 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 CYP11B1P15538 503 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 CDC25CP30307 473 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 SOX5P35711 763 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 KIF11P52732 1056 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 ZXDBP98169 803 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 VITQ6UXI7 678 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 SCD5Q86SK9 330 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 ARID3BQ8IVW6 561 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-212ENST00000608669 WDTC1Q8N5D0 677 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 EPS8L1Q8TE68 723 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 BAP1Q92560 729 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 EDEM1Q92611 657 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 MRPS31Q92665 395 aaKnown RBP12.86□□□□□ -0.35
LINC00963-212ENST00000608669 MYRFLQ96LU7 910 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 ASB16Q96NS5 453 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 RNF38Q9H0F5 515 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 AVENQ9NQS1 362 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-212ENST00000608669 SEPT11Q9NVA2 429 aaKnown RBP12.86□□□□□ -0.35
LINC00963-212ENST00000608669 TRPM5Q9NZQ8 1165 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 EPS15L1Q9UBC2 864 aa12.86□□□□□ -0.35
LINC00963-212ENST00000608669 HEPACAM2A8MVW5 462 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 E5RJQ4 531 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 HMBSP08397 361 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 SKILP12757 684 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 CHRNB2P17787 502 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 PBX1P40424 430 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 GPD2P43304 727 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 PDE6CP51160 858 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 PTK2Q05397 1052 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 CNGA2Q16280 664 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 ARHGAP15Q53QZ3 475 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 TRIM68Q6AZZ1 485 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 BHLHA9Q7RTU4 235 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 ZDHHC14Q8IZN3 488 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 SIX6OS1Q8N1H7 587 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 DDX1Q92499 740 aaKnown RBP12.85□□□□□ -0.35
LINC00963-212ENST00000608669 USP13Q92995 863 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-212ENST00000608669 ASIC4Q96FT7 647 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 SLITRK1Q96PX8 696 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 CPXM1Q96SM3 734 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 DNAI2Q9GZS0 605 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 PDCL3Q9H2J4 239 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 EPHX3Q9H6B9 360 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 TASP1Q9H6P5 420 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 LRRC4Q9HBW1 653 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00963-212ENST00000608669 UXTQ9UBK9 157 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-212ENST00000608669 NAGPAQ9UK23 515 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 NOCTQ9UK39 431 aaKnown RBP12.85□□□□□ -0.35
LINC00963-212ENST00000608669 USTQ9Y2C2 406 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 COL4A2P08572 1712 aa12.85□□□□□ -0.35
LINC00963-212ENST00000608669 TRAV19A0A0A6YYK7 116 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 YJEFN3A6XGL0 299 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 E7ENQ6 273 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 COCHO43405 550 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 MED7O43513 233 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 GRAP2O75791 330 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 RTN3O95197 1032 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-212ENST00000608669 GJB6O95452 261 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 CAVIN2O95810 425 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 PDGFBP01127 241 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-212ENST00000608669 ERBB2P04626 1255 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 GYPCP04921 128 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 SETSIPP0DME0 302 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 MBL2P11226 248 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-212ENST00000608669 KRT9P35527 623 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 STAT1P42224 750 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 PLA2G4AP47712 749 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 PDCLQ13371 301 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 TAF5Q15542 800 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 NAA35Q5VZE5 725 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 SCUBE3Q8IX30 993 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 CMTM8Q8IZV2 173 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 LEMD2Q8NC56 503 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 SLC35F5Q8WV83 523 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 CPA5Q8WXQ8 436 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 SMARCD2Q92925 531 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 PCDHB18PQ96TA0 734 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 TTYH3Q9C0H2 523 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 GKN1Q9NS71 199 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 RASAL2Q9UJF2 1139 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 CPQQ9Y646 472 aa12.84□□□□□ -0.35
LINC00963-212ENST00000608669 MUC3AQ02505 3323 aa12.83□□□□□ -0.35
LINC00963-212ENST00000608669 TTC28Q96AY4 2481 aa12.83□□□□□ -0.36
LINC00963-212ENST00000608669 A0A1W2PQC6 194 aa12.83□□□□□ -0.36
LINC00963-212ENST00000608669 ANHXE9PGG2 379 aa12.83□□□□□ -0.36
LINC00963-212ENST00000608669 MSI1O43347 362 aaKnown RBP12.83□□□□□ -0.36
LINC00963-212ENST00000608669 OAS1P00973 400 aaKnown RBP12.83□□□□□ -0.36
LINC00963-212ENST00000608669 PLEKP08567 350 aaPredicted RBP12.83□□□□□ -0.36
LINC00963-212ENST00000608669 RARGP13631 454 aa12.83□□□□□ -0.36
LINC00963-212ENST00000608669 HDCP19113 662 aa12.83□□□□□ -0.36
LINC00963-212ENST00000608669 RFX1P22670 979 aa12.83□□□□□ -0.36
LINC00963-212ENST00000608669 GDI1P31150 447 aa12.83□□□□□ -0.36
LINC00963-212ENST00000608669 AVPR1AP37288 418 aa12.83□□□□□ -0.36
LINC00963-212ENST00000608669 SLC8A3P57103 927 aa12.83□□□□□ -0.36
LINC00963-212ENST00000608669 YWHAGP61981 247 aaKnown RBP eCLIP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms