RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 PLA2G4AP47712 749 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 RGS7P49802 495 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 CLCN6P51797 869 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 CBX1P83916 185 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 FMO1Q01740 532 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 COL19A1Q14993 1142 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 CTC1Q2NKJ3 1217 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 PKDCCQ504Y2 493 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 HGSNATQ68CP4 663 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 TMC5Q6UXY8 1006 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 TRIM72Q6ZMU5 477 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 HDXQ7Z353 690 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 PIGZQ86VD9 579 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 SLC35F6Q8N357 371 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 RNF10Q8N5U6 811 aaKnown RBP9.35□□□□□ -0.91
ITGB5-212ENST00000608657 C12orf76Q8N812 135 aaPredicted RBP9.35□□□□□ -0.91
ITGB5-212ENST00000608657 TMEM35BQ8NCS4 154 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 C1orf131Q8NDD1 294 aaKnown RBP9.35□□□□□ -0.91
ITGB5-212ENST00000608657 STKLD1Q8NE28 680 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 ZMIZ2Q8NF64 920 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 CMASQ8NFW8 434 aaPredicted RBP9.35□□□□□ -0.91
ITGB5-212ENST00000608657 MAFAQ8NHW3 353 aaPredicted RBP9.35□□□□□ -0.91
ITGB5-212ENST00000608657 GPR152Q8TDT2 470 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 DDX1Q92499 740 aaKnown RBP9.35□□□□□ -0.91
ITGB5-212ENST00000608657 SMG7Q92540 1137 aaKnown RBP9.35□□□□□ -0.91
ITGB5-212ENST00000608657 PSMG2Q969U7 264 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 SPATA17Q96L03 361 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 CEP295NLQ96MC4 621 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 ZNF512Q96ME7 567 aaPredicted RBP9.35□□□□□ -0.91
ITGB5-212ENST00000608657 APOL5Q9BWW9 433 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 PRKD2Q9BZL6 878 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 UBE2ZQ9H832 354 aaPredicted RBP9.35□□□□□ -0.91
ITGB5-212ENST00000608657 NHEJ1Q9H9Q4 299 aaPredicted RBP9.35□□□□□ -0.91
ITGB5-212ENST00000608657 LRRC4Q9HBW1 653 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 PNPLA8Q9NP80 782 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 ST7Q9NRC1 585 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 TMEM30AQ9NV96 361 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 EHD2Q9NZN4 543 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 CLEC1BQ9P126 229 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 MAGED2Q9UNF1 606 aaPredicted RBP9.35□□□□□ -0.91
ITGB5-212ENST00000608657 ASB3Q9Y575 518 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 SAR1BQ9Y6B6 198 aa9.35□□□□□ -0.91
ITGB5-212ENST00000608657 TARSL2A2RTX5 802 aaKnown RBP9.34□□□□□ -0.91
ITGB5-212ENST00000608657 CCDC66A2RUB6 948 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 TULP2O00295 520 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 PRLRP16471 622 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 PTPN2P17706 415 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 CHRNB2P17787 502 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 TCP1P17987 556 aaKnown RBP9.34□□□□□ -0.91
ITGB5-212ENST00000608657 LTBRP36941 435 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 GPD2P43304 727 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 NSFP46459 744 aaKnown RBP9.34□□□□□ -0.91
ITGB5-212ENST00000608657 SLC5A3P53794 718 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 NOMO3P69849 1222 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 ITIH3Q06033 890 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 DLX2Q07687 328 aaPredicted RBP9.34□□□□□ -0.91
ITGB5-212ENST00000608657 PDCLQ13371 301 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 MTF1Q14872 753 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 CLUL1Q15846 466 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 HSP90B2PQ58FF3 399 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 CES5AQ6NT32 575 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 SYCE2Q6PIF2 218 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 GPRIN1Q7Z2K8 1008 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 ZNF571Q7Z3V5 609 aaPredicted RBP9.34□□□□□ -0.91
ITGB5-212ENST00000608657 NUP93Q8N1F7 819 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 SIX6OS1Q8N1H7 587 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 MSANTD4Q8NCY6 345 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 ACRBPQ8NEB7 543 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 IPO4Q8TEX9 1081 aaKnown RBP9.34□□□□□ -0.91
ITGB5-212ENST00000608657 SLC35F5Q8WV83 523 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 ZNF707Q96C28 371 aaPredicted RBP9.34□□□□□ -0.91
ITGB5-212ENST00000608657 CALR3Q96L12 384 aaKnown RBP9.34□□□□□ -0.91
ITGB5-212ENST00000608657 CORO1BQ9BR76 489 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.34□□□□□ -0.91
ITGB5-212ENST00000608657 UBXN6Q9BZV1 441 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 LHX5Q9H2C1 402 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 SYNCQ9H7C4 482 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 ASAH2Q9NR71 780 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 ARHGAP20Q9P2F6 1191 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 UXTQ9UBK9 157 aaPredicted RBP9.34□□□□□ -0.91
ITGB5-212ENST00000608657 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.34□□□□□ -0.918e-17■□□□□ 9.9
ITGB5-212ENST00000608657 CD207Q9UJ71 328 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 GUCA1BQ9UMX6 200 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 JRKLQ9Y4A0 524 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 DENND4CQ5VZ89 1909 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 CDH23Q9H251 3354 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 DENND4AQ7Z401 1863 aa9.34□□□□□ -0.91
ITGB5-212ENST00000608657 HHLA1C9JL84 531 aa9.33□□□□□ -0.92
ITGB5-212ENST00000608657 H3BQ06 376 aaPredicted RBP9.33□□□□□ -0.92
ITGB5-212ENST00000608657 TNFRSF10BO14763 440 aa9.33□□□□□ -0.92
ITGB5-212ENST00000608657 LCA5LO95447 670 aa9.33□□□□□ -0.92
ITGB5-212ENST00000608657 CYP1A1P04798 512 aaPredicted RBP9.33□□□□□ -0.92
ITGB5-212ENST00000608657 PLEKP08567 350 aaPredicted RBP9.33□□□□□ -0.92
ITGB5-212ENST00000608657 MYL4P12829 197 aa9.33□□□□□ -0.92
ITGB5-212ENST00000608657 LCP1P13796 627 aa9.33□□□□□ -0.92
ITGB5-212ENST00000608657 KCNA5P22460 613 aa9.33□□□□□ -0.92
ITGB5-212ENST00000608657 YWHAQP27348 245 aa9.33□□□□□ -0.92
ITGB5-212ENST00000608657 CDH5P33151 784 aaPredicted RBP9.33□□□□□ -0.92
ITGB5-212ENST00000608657 EIF4A3P38919 411 aaKnown RBP9.33□□□□□ -0.92
ITGB5-212ENST00000608657 PAFAH1B1P43034 410 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms