RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 BHLHA9Q7RTU4 235 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 SCD5Q86SK9 330 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 RALGPS2Q86X27 583 aaPredicted RBP11.3□□□□□ -0.6
TUBE1-210ENST00000604967 ARHGEF19Q8IW93 802 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 TRIM59Q8IWR1 403 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 TTC16Q8NEE8 873 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 OSCP1Q8WVF1 389 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 TFAP2BQ92481 460 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 NDRG1Q92597 394 aaKnown RBP11.3□□□□□ -0.6
TUBE1-210ENST00000604967 FBXO32Q969P5 355 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 CYFIP2Q96F07 1278 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 TSG101Q99816 390 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 NT5C1AQ9BXI3 368 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 ECT2Q9H8V3 914 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 KIF9Q9HAQ2 790 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 LMBRD1Q9NUN5 540 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 SPATA6Q9NWH7 488 aaPredicted RBP11.3□□□□□ -0.6
TUBE1-210ENST00000604967 TRPM5Q9NZQ8 1165 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 CPQQ9Y646 472 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 GVINP1Q7Z2Y8 2422 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 RIF1Q5UIP0 2472 aaKnown RBP11.29□□□□□ -0.6
TUBE1-210ENST00000604967 K7ESF4 209 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 MAN2B1O00754 1011 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 PSMA7O14818 248 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 ABL1P00519 1130 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 EGFP01133 1207 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 P4HA1P13674 534 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 KPNA1P52294 538 aaPredicted RBP11.29□□□□□ -0.6
TUBE1-210ENST00000604967 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 CSTF1Q05048 431 aaKnown RBP11.29□□□□□ -0.6
TUBE1-210ENST00000604967 CUL2Q13617 745 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 FOXR2Q6PJQ5 311 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 C12orf40Q86WS4 652 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 CSGALNACT1Q8TDX6 532 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 TMEM176AQ96HP8 235 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 CEP63Q96MT8 703 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 KREMEN1Q96MU8 473 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 NELL2Q99435 816 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 CLSTN2Q9H4D0 955 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 C8orf33Q9H7E9 229 aaPredicted RBP11.29□□□□□ -0.6
TUBE1-210ENST00000604967 DUS2Q9NX74 493 aaKnown RBP11.29□□□□□ -0.6
TUBE1-210ENST00000604967 CFAP97Q9P2B7 532 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 ZMYM5Q9UJ78 669 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 NUDT5Q9UKK9 219 aa11.29□□□□□ -0.6
TUBE1-210ENST00000604967 DCHS1Q96JQ0 3298 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 OTOGLQ3ZCN5 2332 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 A0A1W2PQH9 124 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 TRDMT1O14717 391 aaKnown RBP11.28□□□□□ -0.6
TUBE1-210ENST00000604967 MDM4O15151 490 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 PMM2O15305 246 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 GFRA3O60609 400 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 RTN3O95197 1032 aaPredicted RBP11.28□□□□□ -0.6
TUBE1-210ENST00000604967 CYP17A1P05093 508 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 FAM200BP0CF97 657 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 OPRD1P41143 372 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 GALK1P51570 392 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 KIF11P52732 1056 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 MARSP56192 900 aaKnown RBP11.28□□□□□ -0.6
TUBE1-210ENST00000604967 PAK1Q13153 545 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 DPCR1Q3MIW9 517 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 PKDCCQ504Y2 493 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 ARHGAP17Q68EM7 881 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 DPY19L2P1Q6NXN4 242 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 SUMF1Q8NBK3 374 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 ZBTB44Q8NCP5 570 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 GPT2Q8TD30 523 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 CCDC34Q96HJ3 373 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 HEXIM2Q96MH2 286 aaKnown RBP11.28□□□□□ -0.6
TUBE1-210ENST00000604967 SRRTQ9BXP5 876 aaKnown RBP11.28□□□□□ -0.6
TUBE1-210ENST00000604967 DUSP16Q9BY84 665 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 AJAP1Q9UKB5 411 aaPredicted RBP11.28□□□□□ -0.6
TUBE1-210ENST00000604967 USP3Q9Y6I4 520 aa11.28□□□□□ -0.6
TUBE1-210ENST00000604967 EP300Q09472 2414 aaPredicted RBP11.28□□□□□ -0.6
TUBE1-210ENST00000604967 SLC6A11P48066 632 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 ZNF132P52740 706 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 KCNH2Q12809 1159 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 SRSF5Q13243 272 aaKnown RBP11.27□□□□□ -0.61
TUBE1-210ENST00000604967 PDGFRLQ15198 375 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 CCDC40Q4G0X9 1142 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 RAB41Q5JT25 222 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 GJB7Q6PEY0 223 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 RHBDF2Q6PJF5 856 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 MAMSTRQ6ZN01 415 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 RRAGAQ7L523 313 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 ADGRG2Q8IZP9 1017 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 PHTF2Q8N3S3 785 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 OVCA2Q8WZ82 227 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 SLITRK1Q96PX8 696 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 KLF16Q9BXK1 252 aaPredicted RBP11.27□□□□□ -0.61
TUBE1-210ENST00000604967 IMPG2Q9BZV3 1241 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 ACP6Q9NPH0 428 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 THG1LQ9NWX6 298 aaKnown RBP11.27□□□□□ -0.61
TUBE1-210ENST00000604967 HOOK1Q9UJC3 728 aaKnown RBP11.27□□□□□ -0.61
TUBE1-210ENST00000604967 FBXO4Q9UKT5 387 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 HCN2Q9UL51 889 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 SCML2Q9UQR0 700 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 MRPS17Q9Y2R5 130 aaKnown RBP11.27□□□□□ -0.61
TUBE1-210ENST00000604967 MYO16Q9Y6X6 1858 aa11.27□□□□□ -0.61
TUBE1-210ENST00000604967 MYOFQ9NZM1 2061 aa11.26□□□□□ -0.61
TUBE1-210ENST00000604967 KIAA1549LQ6ZVL6 1849 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms