RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ANKRD52Q8NB46 1076 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 TTC16Q8NEE8 873 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 CCDC26Q8TAB7 109 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 SCAMP5Q8TAC9 235 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 JAKMIP2Q96AA8 810 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 ZFYVE19Q96K21 471 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 SLC22A12Q96S37 553 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 CDK5RAP1Q96SZ6 601 aaKnown RBP12.2□□□□□ -0.46
CCDC12-209ENST00000604164 ARID3AQ99856 593 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 THAP9Q9H5L6 903 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 LMBRD1Q9NUN5 540 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 GTSE1Q9NYZ3 720 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 TBC1D14Q9P2M4 693 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 FBXO4Q9UKT5 387 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 SCML2Q9UQR0 700 aa12.2□□□□□ -0.46
CCDC12-209ENST00000604164 DENND4CQ5VZ89 1909 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 LEFTY2O00292 366 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 LRRN2O75325 713 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 BEST1O76090 585 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 MBD3O95983 291 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 ZDHHC11BP0C7U3 371 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 VDRP11473 427 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 CD19P15391 556 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 ACO1P21399 889 aaKnown RBP12.19□□□□□ -0.46
CCDC12-209ENST00000604164 BCAT1P54687 386 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 GRSF1Q12849 480 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC12-209ENST00000604164 LRMPQ12912 555 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 ZNF528Q3MIS6 628 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 MAMSTRQ6ZN01 415 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 ENOSF1Q7L5Y1 443 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 EHBP1Q8NDI1 1231 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 ZMIZ2Q8NF64 920 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 OTUB2Q96DC9 234 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 CNOT6LQ96LI5 555 aaKnown RBP12.19□□□□□ -0.46
CCDC12-209ENST00000604164 CHRDQ9H2X0 955 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 SEMA4AQ9H3S1 761 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 EBF3Q9H4W6 596 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 LMAN1LQ9HAT1 526 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 GMIPQ9P107 970 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 CHORDC1Q9UHD1 332 aaPredicted RBP12.19□□□□□ -0.46
CCDC12-209ENST00000604164 MTF2Q9Y483 593 aaPredicted RBP12.19□□□□□ -0.46
CCDC12-209ENST00000604164 CPQQ9Y646 472 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 GREB1Q4ZG55 1949 aa12.19□□□□□ -0.46
CCDC12-209ENST00000604164 E2F8A0AVK6 867 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 GTPBP10A4D1E9 387 aaKnown RBP12.18□□□□□ -0.46
CCDC12-209ENST00000604164 COCHO43405 550 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 TLR5O60602 858 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 RALAP11233 206 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 ATP5C1P36542 298 aaKnown RBP12.18□□□□□ -0.46
CCDC12-209ENST00000604164 MTIF2P46199 727 aaKnown RBP12.18□□□□□ -0.46
CCDC12-209ENST00000604164 CCR3P51677 355 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 KIF11P52732 1056 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 MFAP3P55082 362 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 TNK2Q07912 1038 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 BST2Q10589 180 aaKnown RBP12.18□□□□□ -0.46
CCDC12-209ENST00000604164 KLHDC10Q6PID8 442 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 TMEM270Q6UE05 265 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 CCDC186Q7Z3E2 898 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 FAM126AQ9BYI3 521 aaPredicted RBP12.18□□□□□ -0.46
CCDC12-209ENST00000604164 RNF38Q9H0F5 515 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 INTS2Q9H0H0 1204 aaKnown RBP12.18□□□□□ -0.46
CCDC12-209ENST00000604164 ECT2Q9H8V3 914 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 SH3BP1Q9Y3L3 701 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 PCDHB4Q9Y5E5 795 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 OBSL1O75147 1896 aa12.18□□□□□ -0.46
CCDC12-209ENST00000604164 ZNF638Q14966 1978 aaKnown RBP12.18□□□□□ -0.46
CCDC12-209ENST00000604164 MIA3Q5JRA6 1907 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 TICRRQ7Z2Z1 1910 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 HHLA1C9JL84 531 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 TRDMT1O14717 391 aaKnown RBP12.17□□□□□ -0.46
CCDC12-209ENST00000604164 XPO1O14980 1071 aaKnown RBP12.17□□□□□ -0.46
CCDC12-209ENST00000604164 SETSIPP0DME0 302 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 CHRNB1P11230 501 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 DRD1P21728 446 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 NBL1P41271 181 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 NRLP54845 237 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 PON2Q15165 354 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 GOLGA7BQ2TAP0 167 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 EML3Q32P44 896 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 DPCR1Q3MIW9 517 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 FBXO43Q4G163 708 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 PREPLQ4J6C6 727 aaPredicted RBP12.17□□□□□ -0.46
CCDC12-209ENST00000604164 TRIM68Q6AZZ1 485 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 GBP6Q6ZN66 633 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 ZNF276Q8N554 614 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 TTC8Q8TAM2 541 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 LMO3Q8TAP4 145 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 CYLDQ9NQC7 956 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 HPS4Q9NQG7 708 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 SMPD4Q9NXE4 827 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 CLIC5Q9NZA1 410 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 CFAP97Q9P2B7 532 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 DNMT3LQ9UJW3 386 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 LSM7Q9UK45 103 aaKnown RBP12.17□□□□□ -0.46
CCDC12-209ENST00000604164 WNT6Q9Y6F9 365 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 USP3Q9Y6I4 520 aa12.17□□□□□ -0.46
CCDC12-209ENST00000604164 SHISA7A6NL88 538 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 PROB1E7EW31 1015 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms