RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 SEMA4DQ92854 862 aa27.58■■■□□ 2.01
PNKP-216ENST00000601816 HNRNPABQ99729 332 aaKnown RBP27.58■■■□□ 2.01
PNKP-216ENST00000601816 LINC00597Q9H2U6 94 aa27.58■■■□□ 2.01
PNKP-216ENST00000601816 RAB20Q9NX57 234 aa27.58■■■□□ 2.01
PNKP-216ENST00000601816 GMIPQ9P107 970 aa27.58■■■□□ 2.01
PNKP-216ENST00000601816 CHORDC1Q9UHD1 332 aaPredicted RBP27.58■■■□□ 2.01
PNKP-216ENST00000601816 SMG5Q9UPR3 1016 aaKnown RBP27.58■■■□□ 2.01
PNKP-216ENST00000601816 FAM92AA1XBS5 289 aa27.57■■■□□ 2
PNKP-216ENST00000601816 PSMA7O14818 248 aa27.57■■■□□ 2
PNKP-216ENST00000601816 EGFP01133 1207 aa27.57■■■□□ 2
PNKP-216ENST00000601816 DRD1P21728 446 aa27.57■■■□□ 2
PNKP-216ENST00000601816 GALK1P51570 392 aa27.57■■■□□ 2
PNKP-216ENST00000601816 HECTD3Q5T447 861 aa27.57■■■□□ 2
PNKP-216ENST00000601816 CYFIP2Q96F07 1278 aa27.57■■■□□ 2
PNKP-216ENST00000601816 FAXDC2Q96IV6 333 aa27.57■■■□□ 2
PNKP-216ENST00000601816 FBXO44Q9H4M3 255 aa27.57■■■□□ 2
PNKP-216ENST00000601816 FBRSL1Q9HCM7 1045 aaKnown RBP27.57■■■□□ 2
PNKP-216ENST00000601816 CFAP97Q9P2B7 532 aa27.57■■■□□ 2
PNKP-216ENST00000601816 CFAP54Q96N23 3096 aa27.57■■■□□ 2
PNKP-216ENST00000601816 TRIM49BA6NDI0 452 aa27.56■■■□□ 2
PNKP-216ENST00000601816 K7ESF4 209 aa27.56■■■□□ 2
PNKP-216ENST00000601816 COCHO43405 550 aa27.56■■■□□ 2
PNKP-216ENST00000601816 SNX30Q5VWJ9 437 aa27.56■■■□□ 2
PNKP-216ENST00000601816 NAIF1Q69YI7 327 aaPredicted RBP27.56■■■□□ 2
PNKP-216ENST00000601816 FILIP1Q7Z7B0 1213 aa27.56■■■□□ 2
PNKP-216ENST00000601816 WHAMMQ8TF30 809 aa27.56■■■□□ 2
PNKP-216ENST00000601816 CD101Q93033 1021 aa27.56■■■□□ 2
PNKP-216ENST00000601816 C2orf42Q9NWW7 574 aa27.56■■■□□ 2
PNKP-216ENST00000601816 NCDNQ9UBB6 729 aa27.56■■■□□ 2
PNKP-216ENST00000601816 MAN1B1Q9UKM7 699 aa27.56■■■□□ 2
PNKP-216ENST00000601816 CIZ1Q9ULV3 898 aaPredicted RBP27.56■■■□□ 2
PNKP-216ENST00000601816 GVINP1Q7Z2Y8 2422 aa27.55■■■□□ 2
PNKP-216ENST00000601816 CHURC1-FNTBB4DL54 471 aa27.55■■■□□ 2
PNKP-216ENST00000601816 SLC9A3R1O14745 358 aaPredicted RBP27.55■■■□□ 2
PNKP-216ENST00000601816 PPP1R2P41236 205 aa27.55■■■□□ 2
PNKP-216ENST00000601816 FNTBP49356 437 aa27.55■■■□□ 2
PNKP-216ENST00000601816 TUBP50607 506 aa27.55■■■□□ 2
PNKP-216ENST00000601816 ISM2Q6H9L7 571 aa27.55■■■□□ 2
PNKP-216ENST00000601816 CLEC20AQ6ZU45 233 aa27.55■■■□□ 2
PNKP-216ENST00000601816 TTC39CQ8N584 583 aa27.55■■■□□ 2
PNKP-216ENST00000601816 ARMCX3Q9UH62 379 aaPredicted RBP27.55■■■□□ 2
PNKP-216ENST00000601816 ATG13O75143 517 aa27.54■■■□□ 2
PNKP-216ENST00000601816 RNF40O75150 1001 aa27.54■■■□□ 2
PNKP-216ENST00000601816 ZDHHC11BP0C7U3 371 aa27.54■■■□□ 2
PNKP-216ENST00000601816 DMWDQ09019 674 aa27.54■■■□□ 2
PNKP-216ENST00000601816 FBXO43Q4G163 708 aa27.54■■■□□ 2
PNKP-216ENST00000601816 CBWD6Q4V339 395 aa27.54■■■□□ 2
PNKP-216ENST00000601816 CBWD3Q5JTY5 395 aa27.54■■■□□ 2
PNKP-216ENST00000601816 CBWD5Q5RIA9 395 aa27.54■■■□□ 2
PNKP-216ENST00000601816 PKN3Q6P5Z2 889 aa27.54■■■□□ 2
PNKP-216ENST00000601816 JAKMIP2Q96AA8 810 aa27.54■■■□□ 2
PNKP-216ENST00000601816 DHTKD1Q96HY7 919 aaPredicted RBP27.54■■■□□ 2
PNKP-216ENST00000601816 CCSER2Q9H7U1 834 aa27.54■■■□□ 2
PNKP-216ENST00000601816 SCAMP3O14828 347 aaKnown RBP27.53■■■□□ 2
PNKP-216ENST00000601816 GADD45BO75293 160 aaPredicted RBP27.53■■■□□ 2
PNKP-216ENST00000601816 ZNF394Q53GI3 561 aa27.53■■■□□ 2
PNKP-216ENST00000601816 HEATR6Q6AI08 1181 aaKnown RBP27.53■■■□□ 2
PNKP-216ENST00000601816 DCLK2Q8N568 766 aa27.53■■■□□ 2
PNKP-216ENST00000601816 SECISBP2LQ93073 1101 aaKnown RBP27.53■■■□□ 2
PNKP-216ENST00000601816 NACA2Q9H009 215 aa27.53■■■□□ 2
PNKP-216ENST00000601816 PNPLA8Q9NP80 782 aa27.53■■■□□ 2
PNKP-216ENST00000601816 TLR8Q9NR97 1041 aaKnown RBP27.53■■■□□ 2
PNKP-216ENST00000601816 CISHQ9NSE2 258 aa27.53■■■□□ 2
PNKP-216ENST00000601816 CYP17A1P05093 508 aa27.52■■■□□ 2
PNKP-216ENST00000601816 HOXA6P31267 233 aa27.52■■■□□ 2
PNKP-216ENST00000601816 GPRIN1Q7Z2K8 1008 aa27.52■■■□□ 2
PNKP-216ENST00000601816 LONP2Q86WA8 852 aa27.52■■■□□ 2
PNKP-216ENST00000601816 ZFRQ96KR1 1074 aaKnown RBP27.52■■■□□ 2
PNKP-216ENST00000601816 HEXIM2Q96MH2 286 aaKnown RBP27.52■■■□□ 2
PNKP-216ENST00000601816 RAB23Q9ULC3 237 aa27.52■■■□□ 2
PNKP-216ENST00000601816 EP300Q09472 2414 aaPredicted RBP27.52■■■□□ 2
PNKP-216ENST00000601816 OTOGLQ3ZCN5 2332 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 E2F8A0AVK6 867 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 HHLA1C9JL84 531 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 TLR5O60602 858 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 CD44P16070 742 aaKnown RBP27.51■■□□□ 1.99
PNKP-216ENST00000601816 PPP1R26Q5T8A7 1209 aaPredicted RBP27.51■■□□□ 1.99
PNKP-216ENST00000601816 KLHL10Q6JEL2 608 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 KIAA2013Q8IYS2 634 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 ADGRG2Q8IZP9 1017 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 TATDN2Q93075 761 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 CEP63Q96MT8 703 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 ARID3AQ99856 593 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 FAM124BQ9H5Z6 455 aaPredicted RBP27.51■■□□□ 1.99
PNKP-216ENST00000601816 METTL14Q9HCE5 456 aaKnown RBP27.51■■□□□ 1.99
PNKP-216ENST00000601816 TBC1D14Q9P2M4 693 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 SLC8A2Q9UPR5 921 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 SCML2Q9UQR0 700 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 COQ4Q9Y3A0 265 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 SH3BP1Q9Y3L3 701 aa27.51■■□□□ 1.99
PNKP-216ENST00000601816 MYH10P35580 1976 aa27.5■■□□□ 1.99
PNKP-216ENST00000601816 ACO1P21399 889 aaKnown RBP27.5■■□□□ 1.99
PNKP-216ENST00000601816 DHCR24Q15392 516 aa27.5■■□□□ 1.99
PNKP-216ENST00000601816 EZH1Q92800 747 aaPredicted RBP27.5■■□□□ 1.99
PNKP-216ENST00000601816 SLC35C1Q96A29 364 aa27.5■■□□□ 1.99
PNKP-216ENST00000601816 TMEM176AQ96HP8 235 aa27.5■■□□□ 1.99
PNKP-216ENST00000601816 DUSP16Q9BY84 665 aa27.5■■□□□ 1.99
PNKP-216ENST00000601816 GPR179Q6PRD1 2367 aa27.49■■□□□ 1.99
PNKP-216ENST00000601816 ADH1CP00326 375 aa27.49■■□□□ 1.99
PNKP-216ENST00000601816 CNR2P34972 360 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms