RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 SYPP08247 313 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 HOXB2P14652 356 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 NDUFV2P19404 249 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 CACNA2D1P54289 1103 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 GRIN1Q05586 938 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 SLC14A1Q13336 389 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 VSTM1Q6UX27 236 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 C4orf50Q6ZRC1 276 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 ZNF720Q7Z2F6 126 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 LIMS2Q7Z4I7 341 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 RABEPKQ7Z6M1 372 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 MARCH9Q86YJ5 346 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 RAD54LQ92698 747 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 PCED1BQ96HM7 432 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 ZFRQ96KR1 1074 aaKnown RBP17.1■□□□□ 0.33
SSBP4-211ENST00000601614 ACOX2Q99424 681 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 STRA6Q9BX79 667 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 CYP8B1Q9UNU6 501 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 PCDHB9Q9Y5E1 797 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 KNL1Q8NG31 2342 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 ASH1LQ9NR48 2969 aaKnown RBP17.09■□□□□ 0.33
SSBP4-211ENST00000601614 TBC1D3BA6NDS4 549 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 F8VP50 259 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 TBCAO75347 108 aaKnown RBP17.09■□□□□ 0.33
SSBP4-211ENST00000601614 TULP3O75386 442 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 ABL1P00519 1130 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 KRT19P08727 400 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 MAOBP27338 520 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 TAF10Q12962 218 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 PLEKHG6Q3KR16 790 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 RILPL1Q5EBL4 403 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 TOGARAM2Q6ZUX3 1019 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 SFR1Q86XK3 245 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 ADAM32Q8TC27 787 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 WBP2Q969T9 261 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 MTMR12Q9C0I1 747 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 SLC6A17Q9H1V8 727 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 ITGA11Q9UKX5 1188 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 TMEM131Q92545 1883 aa17.09■□□□□ 0.33
SSBP4-211ENST00000601614 CABIN1Q9Y6J0 2220 aa17.08■□□□□ 0.33
SSBP4-211ENST00000601614 MYH10P35580 1976 aa17.08■□□□□ 0.33
SSBP4-211ENST00000601614 PTPRJQ12913 1337 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 GOLGA8IPA6NC78 632 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 GOLGA8JA6NMD2 632 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-211ENST00000601614 MBL2P11226 248 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-211ENST00000601614 ABCD1P33897 745 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 NOP14P78316 857 aaKnown RBP17.08■□□□□ 0.32
SSBP4-211ENST00000601614 CYP27A1Q02318 531 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 GRIK2Q13002 908 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 C10orf76Q5T2E6 689 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 EGFLAMQ63HQ2 1017 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 ARL6IP4Q66PJ3 421 aaKnown RBP17.08■□□□□ 0.32
SSBP4-211ENST00000601614 TERB1Q8NA31 727 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 CALML4Q96GE6 196 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 ZNF419Q96HQ0 510 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-211ENST00000601614 PDE11AQ9HCR9 933 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 SCUBE2Q9NQ36 999 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 TOR4AQ9NXH8 423 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 RBAKQ9NYW8 714 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-211ENST00000601614 PCOLCE2Q9UKZ9 415 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 CDH9Q9ULB4 789 aa17.08■□□□□ 0.32
SSBP4-211ENST00000601614 PDGFRBP09619 1106 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 ANXA13P27216 316 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 NTSR1P30989 418 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 GAD2Q05329 585 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 POSTNQ15063 836 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 MCTP1Q6DN14 999 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 GLRX5Q86SX6 157 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 BBS7Q8IWZ6 715 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 RGL4Q8IZJ4 473 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 KCNV2Q8TDN2 545 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 IPO4Q8TEX9 1081 aaKnown RBP17.07■□□□□ 0.32
SSBP4-211ENST00000601614 CACTINQ8WUQ7 758 aaKnown RBP17.07■□□□□ 0.32
SSBP4-211ENST00000601614 CEP295NLQ96MC4 621 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 IL21RQ9HBE5 538 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 CACNA2D2Q9NY47 1150 aa17.07■□□□□ 0.32
SSBP4-211ENST00000601614 E2F8A0AVK6 867 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 HOXC11O43248 304 aaPredicted RBP17.06■□□□□ 0.32
SSBP4-211ENST00000601614 COCHO43405 550 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 SLC26A4O43511 780 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 PRB1P04280 392 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 UBA7P41226 1012 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 PPP3CCP48454 512 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 RBP5P82980 135 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 IFRD2Q12894 506 aaPredicted RBP17.06■□□□□ 0.32
SSBP4-211ENST00000601614 DPH6Q7L8W6 267 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 DYMQ7RTS9 669 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 TMEM25Q86YD3 366 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 OR5B17Q8NGF7 314 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 MYCBPAPQ8TBZ2 947 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 LARP4BQ92615 738 aaKnown RBP17.06■□□□□ 0.32
SSBP4-211ENST00000601614 HVCN1Q96D96 273 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 C8orf48Q96LL4 319 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 AK8Q96MA6 479 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 CBWD1Q9BRT8 395 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 TRIM9Q9C026 710 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 TBC1D7Q9P0N9 293 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 TBC1D14Q9P2M4 693 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 DEC1Q9P2X7 70 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms