RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 FAM49BQ9NUQ9 324 aa24■■□□□ 1.43
SSBP4-209ENST00000601357 PCDHA5Q9Y5H7 936 aa24■■□□□ 1.43
SSBP4-209ENST00000601357 CETN3O15182 167 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 COCHO43405 550 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 CILPO75339 1184 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 NFATC1O95644 943 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 TUBP50607 506 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 NR1H3Q13133 447 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 GAB4Q2WGN9 574 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 FBXO43Q4G163 708 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 LONP2Q86WA8 852 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 SEMA4DQ92854 862 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 ERCC4Q92889 916 aaPredicted RBP23.99■■□□□ 1.43
SSBP4-209ENST00000601357 CD101Q93033 1021 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 EXOC4Q96A65 974 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 FAXDC2Q96IV6 333 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 NT5C1AQ9BXI3 368 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 SMPD4Q9NXE4 827 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 NCDNQ9UBB6 729 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 CHORDC1Q9UHD1 332 aaPredicted RBP23.99■■□□□ 1.43
SSBP4-209ENST00000601357 MYH10P35580 1976 aa23.99■■□□□ 1.43
SSBP4-209ENST00000601357 HRO43593 1189 aa23.98■■□□□ 1.43
SSBP4-209ENST00000601357 RNF40O75150 1001 aa23.98■■□□□ 1.43
SSBP4-209ENST00000601357 SMC2O95347 1197 aa23.98■■□□□ 1.43
SSBP4-209ENST00000601357 CNR2P34972 360 aa23.98■■□□□ 1.43
SSBP4-209ENST00000601357 PMS1P54277 932 aaKnown RBP23.98■■□□□ 1.43
SSBP4-209ENST00000601357 MAP3K7CLP57077 242 aa23.98■■□□□ 1.43
SSBP4-209ENST00000601357 CLEC20AQ6ZU45 233 aa23.98■■□□□ 1.43
SSBP4-209ENST00000601357 FILIP1Q7Z7B0 1213 aa23.98■■□□□ 1.43
SSBP4-209ENST00000601357 DDX42Q86XP3 938 aaKnown RBP eCLIP23.98■■□□□ 1.43
SSBP4-209ENST00000601357 ADGRG2Q8IZP9 1017 aa23.98■■□□□ 1.43
SSBP4-209ENST00000601357 GMIPQ9P107 970 aa23.98■■□□□ 1.43
SSBP4-209ENST00000601357 CFAP97Q9P2B7 532 aa23.98■■□□□ 1.43
SSBP4-209ENST00000601357 DNAH14Q0VDD8 3507 aa23.98■■□□□ 1.43
SSBP4-209ENST00000601357 HHLA1C9JL84 531 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 ATG13O75143 517 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 EPB41P11171 864 aaKnown RBP23.97■■□□□ 1.43
SSBP4-209ENST00000601357 MBL2P11226 248 aaPredicted RBP23.97■■□□□ 1.43
SSBP4-209ENST00000601357 OPRD1P41143 372 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 PGFP49763 221 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 MXI1P50539 228 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 HECTD3Q5T447 861 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 ANKRD40Q6AI12 368 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 ELOA2Q8IYF1 753 aaPredicted RBP23.97■■□□□ 1.43
SSBP4-209ENST00000601357 FBXL13Q8NEE6 735 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 SMARCE1Q969G3 411 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 CYFIP2Q96F07 1278 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 GTPBP4Q9BZE4 634 aaKnown RBP23.97■■□□□ 1.43
SSBP4-209ENST00000601357 FBXO44Q9H4M3 255 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 CCSER2Q9H7U1 834 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 RAB20Q9NX57 234 aa23.97■■□□□ 1.43
SSBP4-209ENST00000601357 SLC9A3R1O14745 358 aaPredicted RBP23.96■■□□□ 1.43
SSBP4-209ENST00000601357 SLC16A3O15427 465 aaKnown RBP23.96■■□□□ 1.43
SSBP4-209ENST00000601357 STX10O60499 249 aa23.96■■□□□ 1.43
SSBP4-209ENST00000601357 CYP17A1P05093 508 aa23.96■■□□□ 1.43
SSBP4-209ENST00000601357 FAM200BP0CF97 657 aa23.96■■□□□ 1.43
SSBP4-209ENST00000601357 CD58P19256 250 aa23.96■■□□□ 1.43
SSBP4-209ENST00000601357 TRIM21P19474 475 aaKnown RBP23.96■■□□□ 1.43
SSBP4-209ENST00000601357 ADORA2BP29275 332 aa23.96■■□□□ 1.43
SSBP4-209ENST00000601357 FKBP3Q00688 224 aaKnown RBP23.96■■□□□ 1.43
SSBP4-209ENST00000601357 GPRIN1Q7Z2K8 1008 aa23.96■■□□□ 1.43
SSBP4-209ENST00000601357 WDR5BQ86VZ2 330 aa23.96■■□□□ 1.43
SSBP4-209ENST00000601357 CCDC150Q8NCX0 1101 aa23.96■■□□□ 1.43
SSBP4-209ENST00000601357 DUSP9Q99956 384 aaKnown RBP23.96■■□□□ 1.43
SSBP4-209ENST00000601357 PNPLA8Q9NP80 782 aa23.96■■□□□ 1.43
SSBP4-209ENST00000601357 HOOK1Q9UJC3 728 aaKnown RBP23.96■■□□□ 1.43
SSBP4-209ENST00000601357 E2F8A0AVK6 867 aa23.95■■□□□ 1.42
SSBP4-209ENST00000601357 ID4P47928 161 aa23.95■■□□□ 1.42
SSBP4-209ENST00000601357 LRRC63Q05C16 580 aa23.95■■□□□ 1.42
SSBP4-209ENST00000601357 SRSF5Q13243 272 aaKnown RBP23.95■■□□□ 1.42
SSBP4-209ENST00000601357 HEATR6Q6AI08 1181 aaKnown RBP23.95■■□□□ 1.42
SSBP4-209ENST00000601357 SECISBP2LQ93073 1101 aaKnown RBP23.95■■□□□ 1.42
SSBP4-209ENST00000601357 TSG101Q99816 390 aa23.95■■□□□ 1.42
SSBP4-209ENST00000601357 COQ4Q9Y3A0 265 aa23.95■■□□□ 1.42
SSBP4-209ENST00000601357 ATG2BQ96BY7 2078 aa23.95■■□□□ 1.42
SSBP4-209ENST00000601357 CCDC163A0A0D9SF12 145 aa23.94■■□□□ 1.42
SSBP4-209ENST00000601357 TRIM49BA6NDI0 452 aa23.94■■□□□ 1.42
SSBP4-209ENST00000601357 SCAMP3O14828 347 aaKnown RBP23.94■■□□□ 1.42
SSBP4-209ENST00000601357 TGM1P22735 817 aa23.94■■□□□ 1.42
SSBP4-209ENST00000601357 DHCR24Q15392 516 aa23.94■■□□□ 1.42
SSBP4-209ENST00000601357 CBWD6Q4V339 395 aa23.94■■□□□ 1.42
SSBP4-209ENST00000601357 CBWD3Q5JTY5 395 aa23.94■■□□□ 1.42
SSBP4-209ENST00000601357 CBWD5Q5RIA9 395 aa23.94■■□□□ 1.42
SSBP4-209ENST00000601357 LAIR1Q6GTX8 287 aa23.94■■□□□ 1.42
SSBP4-209ENST00000601357 GPR161Q8N6U8 529 aaKnown RBP23.94■■□□□ 1.42
SSBP4-209ENST00000601357 FAM124BQ9H5Z6 455 aaPredicted RBP23.94■■□□□ 1.42
SSBP4-209ENST00000601357 SCML2Q9UQR0 700 aa23.94■■□□□ 1.42
SSBP4-209ENST00000601357 EML5Q05BV3 1969 aa23.93■■□□□ 1.42
SSBP4-209ENST00000601357 SIM2Q14190 667 aaPredicted RBP23.93■■□□□ 1.42
SSBP4-209ENST00000601357 PPP1R26Q5T8A7 1209 aaPredicted RBP23.93■■□□□ 1.42
SSBP4-209ENST00000601357 RHBDF2Q6PJF5 856 aa23.93■■□□□ 1.42
SSBP4-209ENST00000601357 SYT13Q7L8C5 426 aa23.93■■□□□ 1.42
SSBP4-209ENST00000601357 TTC39CQ8N584 583 aa23.93■■□□□ 1.42
SSBP4-209ENST00000601357 RPLP0P6Q8NHW5 317 aa23.93■■□□□ 1.42
SSBP4-209ENST00000601357 ARID3AQ99856 593 aa23.93■■□□□ 1.42
SSBP4-209ENST00000601357 CYLDQ9NQC7 956 aa23.93■■□□□ 1.42
SSBP4-209ENST00000601357 TLR8Q9NR97 1041 aaKnown RBP23.93■■□□□ 1.42
SSBP4-209ENST00000601357 CISHQ9NSE2 258 aa23.93■■□□□ 1.42
SSBP4-209ENST00000601357 POLR3BQ9NW08 1133 aaPredicted RBP23.93■■□□□ 1.42
SSBP4-209ENST00000601357 TBC1D14Q9P2M4 693 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms