RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ATP5OP48047 213 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 IGBP1P78318 339 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 ZNF200P98182 395 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 NAA25Q14CX7 972 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 ACAP1Q15027 740 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 CTC1Q2NKJ3 1217 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 SLC44A1Q8WWI5 657 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 FAM111AQ96PZ2 611 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 C2CD4BA6NLJ0 364 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 E5RJQ4 531 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 FAM155BO75949 473 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 ENDOD1O94919 500 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 INHBAP08476 426 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 PYGBP11216 843 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 STIP1P31948 543 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 ANKRD20A2Q5SQ80 823 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 ANKRD20A1Q5TYW2 823 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 ANKRD20A3Q5VUR7 823 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 PRPF39Q86UA1 669 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 EXOC8Q8IYI6 725 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 LRRN4Q8WUT4 740 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 FAF2Q96CS3 445 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 CPB2Q96IY4 423 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 CNPY3Q9BT09 278 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 IFT122Q9HBG6 1241 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 RAB6BQ9NRW1 208 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 IQANK1A0A1B0GTG1 560 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 PEX11AO75192 247 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 ECM2O94769 699 aaPredicted RBP21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 HMGCRP04035 888 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 FAXCQ5TGI0 409 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 OR6B2Q6IFH4 312 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 FAM183BPQ6ZVS7 135 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 TTC17Q96AE7 1141 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 CFAP36Q96G28 342 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 TSSK1BQ9BXA7 367 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 RNPEPQ9H4A4 650 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 GPATCH2LQ9NWQ4 482 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 SLC5A4Q9NY91 659 aa21.08■□□□□ 0.97
SHKBP1-225ENST00000600733 TSHRP16473 764 aa21.08■□□□□ 0.96
SHKBP1-225ENST00000600733 ETV4P43268 484 aa21.08■□□□□ 0.96
SHKBP1-225ENST00000600733 RASSF2P50749 326 aa21.08■□□□□ 0.96
SHKBP1-225ENST00000600733 NEK3P51956 506 aa21.08■□□□□ 0.96
SHKBP1-225ENST00000600733 SH2D5Q6ZV89 423 aa21.08■□□□□ 0.96
SHKBP1-225ENST00000600733 ZNF398Q8TD17 642 aa21.08■□□□□ 0.96
SHKBP1-225ENST00000600733 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.08■□□□□ 0.96
SHKBP1-225ENST00000600733 APOPT1Q96IL0 206 aa21.08■□□□□ 0.96
SHKBP1-225ENST00000600733 HPDLQ96IR7 371 aa21.08■□□□□ 0.96
SHKBP1-225ENST00000600733 USP29Q9HBJ7 922 aa21.08■□□□□ 0.96
SHKBP1-225ENST00000600733 GPRC5DQ9NZD1 345 aa21.08■□□□□ 0.96
SHKBP1-225ENST00000600733 TRAFD1O14545 582 aaPredicted RBP21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 KCNN4O15554 427 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 DHRS4L1P0CG22 281 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 VDRP11473 427 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 NDST1P52848 882 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 C12orf29Q8N999 325 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 RNF157Q96PX1 679 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 TRIM55Q9BYV6 548 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 RNPEPL1Q9HAU8 725 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 HEY1Q9Y5J3 304 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 PRPSAP2O60256 369 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 CNMDO75829 334 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 BGNP21810 368 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 CDC25CP30307 473 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 RGS7P49802 495 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 SLC10A6Q3KNW5 377 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 SCYL2Q6P3W7 929 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 PLD5Q8N7P1 536 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 PRR11Q96HE9 360 aaPredicted RBP21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 MIPEPQ99797 713 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 HEY2Q9UBP5 337 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 TSPAN16Q9UKR8 245 aa21.07■□□□□ 0.96
SHKBP1-225ENST00000600733 C2orf71A6NGG8 1288 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 NEFHP12036 1026 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 IL4RP24394 825 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 PTPN4P29074 926 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 YWHAZP63104 245 aaKnown RBP21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 TFDP2Q14188 446 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 KRT81Q14533 505 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 SPDYAQ5MJ70 313 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 MIEF2Q96C03 454 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 SMARCAD1Q9H4L7 1026 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 KCNK13Q9HB14 408 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 CYP3A43Q9HB55 503 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 TXNRD2Q9NNW7 524 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 FBXO6Q9NRD1 293 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 PRMT7Q9NVM4 692 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 PAPPA2Q9BXP8 1791 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 A0A087WZ62 844 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 CFAP69A5D8W1 941 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 CHADO15335 359 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 SLC18A2Q05940 514 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 FAM47CQ5HY64 1035 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 CTAGE3PQ8IX95 158 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 MAB21L3Q8N8X9 362 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 TTC8Q8TAM2 541 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 FDXACB1Q9BRP7 624 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 PDZD7Q9H5P4 517 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 DENND2DQ9H6A0 471 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms