RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 LRRC3Q9BY71 257 aa19.9■□□□□ 0.78
CCDC9-205ENST00000600117 NUCKS1Q9H1E3 243 aaKnown RBP19.9■□□□□ 0.78
CCDC9-205ENST00000600117 LIMD1Q9UGP4 676 aa19.9■□□□□ 0.78
CCDC9-205ENST00000600117 ASB3Q9Y575 518 aa19.9■□□□□ 0.78
CCDC9-205ENST00000600117 DOCK6Q96HP0 2047 aa19.9■□□□□ 0.78
CCDC9-205ENST00000600117 NOTCH4Q99466 2003 aa19.9■□□□□ 0.78
CCDC9-205ENST00000600117 SLC38A8A6NNN8 435 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 MFAP3LO75121 409 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 XYLBO75191 536 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 MMEP08473 750 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 SETSIPP0DME0 302 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 HMGA1P17096 107 aaKnown RBP19.89■□□□□ 0.77
CCDC9-205ENST00000600117 ANXA13P27216 316 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 GPD2P43304 727 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 CDR2Q01850 454 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 GOLGA8FQ08AF8 430 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 GOLGA8DPQ0D2H9 430 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 VEPH1Q14D04 833 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 TAF3Q5VWG9 929 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 DENND4AQ7Z401 1863 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 DNAJB7Q7Z6W7 309 aaPredicted RBP19.89■□□□□ 0.77
CCDC9-205ENST00000600117 ZNF677Q86XU0 584 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 CCDC105Q8IYK2 499 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 SLC35F5Q8WV83 523 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 SECISBP2LQ93073 1101 aaKnown RBP19.89■□□□□ 0.77
CCDC9-205ENST00000600117 UBXN6Q9BZV1 441 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 PNPLA8Q9NP80 782 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 HCFC1R1Q9NWW0 138 aa19.89■□□□□ 0.77
CCDC9-205ENST00000600117 DNMT3BQ9UBC3 853 aaKnown RBP19.89■□□□□ 0.77
CCDC9-205ENST00000600117 SPTBN2O15020 2390 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 XPO1O14980 1071 aaKnown RBP19.88■□□□□ 0.77
CCDC9-205ENST00000600117 GABBR2O75899 941 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 HNRNPH3P31942 346 aaKnown RBP19.88■□□□□ 0.77
CCDC9-205ENST00000600117 PLA2G4AP47712 749 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 USP46P62068 366 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 FMO1Q01740 532 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 ANGPT1Q15389 498 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 HGSNATQ68CP4 663 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 GPRIN1Q7Z2K8 1008 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 PIGZQ86VD9 579 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 TMC8Q8IU68 726 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 PASD1Q8IV76 773 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 WDTC1Q8N5D0 677 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 ZNF512Q96ME7 567 aaPredicted RBP19.88■□□□□ 0.77
CCDC9-205ENST00000600117 DNAJC7Q99615 494 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 TTLL2Q9BWV7 592 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 LHX5Q9H2C1 402 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 SEMA4AQ9H3S1 761 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 ZNF334Q9HCZ1 680 aaPredicted RBP19.88■□□□□ 0.77
CCDC9-205ENST00000600117 IL37Q9NZH6 218 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 CYTH4Q9UIA0 394 aa19.88■□□□□ 0.77
CCDC9-205ENST00000600117 MED19A0JLT2 244 aaPredicted RBP19.87■□□□□ 0.77
CCDC9-205ENST00000600117 CCDC172P0C7W6 258 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 CSH1P0DML2 217 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 CSH2P0DML3 217 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 CDH5P33151 784 aaPredicted RBP19.87■□□□□ 0.77
CCDC9-205ENST00000600117 SLC5A3P53794 718 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 EPHA5P54756 1037 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 ADKP55263 362 aaKnown RBP19.87■□□□□ 0.77
CCDC9-205ENST00000600117 NTHL1P78549 312 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 GSE1Q14687 1217 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 ATAT1Q5SQI0 421 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 PMF1Q6P1K2 205 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 DENND5BQ6ZUT9 1274 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.87■□□□□ 0.77
CCDC9-205ENST00000600117 ITIH5Q86UX2 942 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 HS6ST3Q8IZP7 471 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 NUP93Q8N1F7 819 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 ELMOD1Q8N336 334 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 RMDN1Q96DB5 314 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 MYRFLQ96LU7 910 aa19.87■□□□□ 0.77
CCDC9-205ENST00000600117 AKR1B15C9JRZ8 316 aaPredicted RBP19.86■□□□□ 0.77
CCDC9-205ENST00000600117 NRG2O14511 850 aaPredicted RBP19.86■□□□□ 0.77
CCDC9-205ENST00000600117 PI15O43692 258 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 TPM1P09493 284 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 SKILP12757 684 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 PTPN2P17706 415 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 RPL34P49207 117 aaKnown RBP19.86■□□□□ 0.77
CCDC9-205ENST00000600117 SLC8A3P57103 927 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 KLHL30Q0D2K2 578 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 RAB41Q5JT25 222 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 WDR59Q6PJI9 974 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 GRASPQ7Z6J2 395 aaPredicted RBP19.86■□□□□ 0.77
CCDC9-205ENST00000600117 TC2NQ8N9U0 490 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 DTWD2Q8NBA8 298 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 OR8K1Q8NGG5 319 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 SCAMP5Q8TAC9 235 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 KCTD13Q8WZ19 329 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 TRMT2BQ96GJ1 504 aaKnown RBP19.86■□□□□ 0.77
CCDC9-205ENST00000600117 PCDHB18PQ96TA0 734 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 AGPAT1Q99943 283 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 CORO1BQ9BR76 489 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 HAUS4Q9H6D7 363 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 PIDD1Q9HB75 910 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 IL21Q9HBE4 155 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 ABHD10Q9NUJ1 306 aa19.86■□□□□ 0.77
CCDC9-205ENST00000600117 ZNF638Q14966 1978 aaKnown RBP19.86■□□□□ 0.77
CCDC9-205ENST00000600117 FAM92AA1XBS5 289 aa19.85■□□□□ 0.77
CCDC9-205ENST00000600117 RTN3O95197 1032 aaPredicted RBP19.85■□□□□ 0.77
CCDC9-205ENST00000600117 CYP1A1P04798 512 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms