RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 IFNAR2P48551 515 aa29.75■■■□□ 2.35
ZNF558-206ENST00000599938 RUNX3Q13761 415 aa29.75■■■□□ 2.35
ZNF558-206ENST00000599938 DPCR1Q3MIW9 517 aa29.75■■■□□ 2.35
ZNF558-206ENST00000599938 TXNDC11Q6PKC3 985 aa29.75■■■□□ 2.35
ZNF558-206ENST00000599938 PPM1KQ8N3J5 372 aa29.75■■■□□ 2.35
ZNF558-206ENST00000599938 OSCP1Q8WVF1 389 aa29.75■■■□□ 2.35
ZNF558-206ENST00000599938 DUSP16Q9BY84 665 aa29.75■■■□□ 2.35
ZNF558-206ENST00000599938 RNF38Q9H0F5 515 aa29.75■■■□□ 2.35
ZNF558-206ENST00000599938 DUS2Q9NX74 493 aaKnown RBP29.75■■■□□ 2.35
ZNF558-206ENST00000599938 WNT6Q9Y6F9 365 aa29.75■■■□□ 2.35
ZNF558-206ENST00000599938 MYO15AQ9UKN7 3530 aa29.75■■■□□ 2.35
ZNF558-206ENST00000599938 HHLA1C9JL84 531 aa29.74■■■□□ 2.35
ZNF558-206ENST00000599938 GOLGA6L22H0YM25 854 aa29.74■■■□□ 2.35
ZNF558-206ENST00000599938 LEFTY2O00292 366 aa29.74■■■□□ 2.35
ZNF558-206ENST00000599938 MBL2P11226 248 aaPredicted RBP29.74■■■□□ 2.35
ZNF558-206ENST00000599938 HECTD3Q5T447 861 aa29.74■■■□□ 2.35
ZNF558-206ENST00000599938 ARHGAP17Q68EM7 881 aa29.74■■■□□ 2.35
ZNF558-206ENST00000599938 CREBRFQ8IUR6 639 aa29.74■■■□□ 2.35
ZNF558-206ENST00000599938 MED15Q96RN5 788 aa29.74■■■□□ 2.35
ZNF558-206ENST00000599938 PHOX2BQ99453 314 aa29.74■■■□□ 2.35
ZNF558-206ENST00000599938 ZDHHC11BP0C7U3 371 aa29.73■■■□□ 2.35
ZNF558-206ENST00000599938 ACO1P21399 889 aaKnown RBP29.73■■■□□ 2.35
ZNF558-206ENST00000599938 TUBP50607 506 aa29.73■■■□□ 2.35
ZNF558-206ENST00000599938 ZXDBP98169 803 aa29.73■■■□□ 2.35
ZNF558-206ENST00000599938 FZD5Q13467 585 aa29.73■■■□□ 2.35
ZNF558-206ENST00000599938 TPD52L1Q16890 204 aaPredicted RBP29.73■■■□□ 2.35
ZNF558-206ENST00000599938 SNX30Q5VWJ9 437 aa29.73■■■□□ 2.35
ZNF558-206ENST00000599938 CPA6Q8N4T0 437 aa29.73■■■□□ 2.35
ZNF558-206ENST00000599938 UBR7Q8N806 425 aa29.73■■■□□ 2.35
ZNF558-206ENST00000599938 LMO3Q8TAP4 145 aa29.73■■■□□ 2.35
ZNF558-206ENST00000599938 TLR8Q9NR97 1041 aaKnown RBP29.73■■■□□ 2.35
ZNF558-206ENST00000599938 DACH1Q9UI36 760 aa29.73■■■□□ 2.35
ZNF558-206ENST00000599938 OTOL1A6NHN0 477 aaPredicted RBP29.72■■■□□ 2.35
ZNF558-206ENST00000599938 CYP26A1O43174 497 aa29.72■■■□□ 2.35
ZNF558-206ENST00000599938 COCHO43405 550 aa29.72■■■□□ 2.35
ZNF558-206ENST00000599938 PON2Q15165 354 aa29.72■■■□□ 2.35
ZNF558-206ENST00000599938 SGO2Q562F6 1265 aa29.72■■■□□ 2.35
ZNF558-206ENST00000599938 ATP2A3Q93084 1043 aa29.72■■■□□ 2.35
ZNF558-206ENST00000599938 NACA2Q9H009 215 aa29.72■■■□□ 2.35
ZNF558-206ENST00000599938 CCSER2Q9H7U1 834 aa29.72■■■□□ 2.35
ZNF558-206ENST00000599938 SCML2Q9UQR0 700 aa29.72■■■□□ 2.35
ZNF558-206ENST00000599938 CD19P15391 556 aa29.71■■■□□ 2.35
ZNF558-206ENST00000599938 LRRC32Q14392 662 aa29.71■■■□□ 2.35
ZNF558-206ENST00000599938 GOLGA7BQ2TAP0 167 aa29.71■■■□□ 2.35
ZNF558-206ENST00000599938 EML3Q32P44 896 aa29.71■■■□□ 2.35
ZNF558-206ENST00000599938 DDX42Q86XP3 938 aaKnown RBP eCLIP29.71■■■□□ 2.35
ZNF558-206ENST00000599938 GPT2Q8TD30 523 aa29.71■■■□□ 2.35
ZNF558-206ENST00000599938 KAT5Q92993 513 aa29.71■■■□□ 2.35
ZNF558-206ENST00000599938 INTS2Q9H0H0 1204 aaKnown RBP29.71■■■□□ 2.35
ZNF558-206ENST00000599938 CHRDQ9H2X0 955 aa29.71■■■□□ 2.35
ZNF558-206ENST00000599938 LMAN1LQ9HAT1 526 aa29.71■■■□□ 2.35
ZNF558-206ENST00000599938 LAMTOR5O43504 91 aa29.7■■■□□ 2.35
ZNF558-206ENST00000599938 TLR5O60602 858 aa29.7■■■□□ 2.35
ZNF558-206ENST00000599938 KIF11P52732 1056 aa29.7■■■□□ 2.35
ZNF558-206ENST00000599938 SLC8A3P57103 927 aa29.7■■■□□ 2.35
ZNF558-206ENST00000599938 TMEM270Q6UE05 265 aa29.7■■■□□ 2.35
ZNF558-206ENST00000599938 ARHGEF19Q8IW93 802 aa29.7■■■□□ 2.35
ZNF558-206ENST00000599938 EHBP1Q8NDI1 1231 aa29.7■■■□□ 2.35
ZNF558-206ENST00000599938 ECT2Q9H8V3 914 aa29.7■■■□□ 2.35
ZNF558-206ENST00000599938 CFAP97Q9P2B7 532 aa29.7■■■□□ 2.35
ZNF558-206ENST00000599938 TSPAN16Q9UKR8 245 aa29.7■■■□□ 2.35
ZNF558-206ENST00000599938 PCDHB4Q9Y5E5 795 aa29.7■■■□□ 2.35
ZNF558-206ENST00000599938 CHRNB1P11230 501 aa29.69■■■□□ 2.34
ZNF558-206ENST00000599938 PGFP49763 221 aa29.69■■■□□ 2.34
ZNF558-206ENST00000599938 GCNT1Q02742 428 aa29.69■■■□□ 2.34
ZNF558-206ENST00000599938 RRAGAQ7L523 313 aa29.69■■■□□ 2.34
ZNF558-206ENST00000599938 ANKRD52Q8NB46 1076 aa29.69■■■□□ 2.34
ZNF558-206ENST00000599938 DMDP11532 3685 aa29.68■■■□□ 2.34
ZNF558-206ENST00000599938 SCAMP3O14828 347 aaKnown RBP29.68■■■□□ 2.34
ZNF558-206ENST00000599938 MTIF2P46199 727 aaKnown RBP29.68■■■□□ 2.34
ZNF558-206ENST00000599938 BCAT1P54687 386 aa29.68■■■□□ 2.34
ZNF558-206ENST00000599938 AMPD2Q01433 879 aa29.68■■■□□ 2.34
ZNF558-206ENST00000599938 MTAPQ13126 283 aa29.68■■■□□ 2.34
ZNF558-206ENST00000599938 PIGZQ86VD9 579 aa29.68■■■□□ 2.34
ZNF558-206ENST00000599938 TTC30AQ86WT1 665 aa29.68■■■□□ 2.34
ZNF558-206ENST00000599938 IRF2BP1Q8IU81 584 aa29.68■■■□□ 2.34
ZNF558-206ENST00000599938 CHFRQ96EP1 664 aa29.68■■■□□ 2.34
ZNF558-206ENST00000599938 ZFRQ96KR1 1074 aaKnown RBP29.68■■■□□ 2.34
ZNF558-206ENST00000599938 IER2Q9BTL4 223 aa29.68■■■□□ 2.34
ZNF558-206ENST00000599938 THAP9Q9H5L6 903 aa29.68■■■□□ 2.34
ZNF558-206ENST00000599938 RBM12Q9NTZ6 932 aaKnown RBP29.68■■■□□ 2.34
ZNF558-206ENST00000599938 HESX1Q9UBX0 185 aa29.68■■■□□ 2.34
ZNF558-206ENST00000599938 NFATC1O95644 943 aa29.67■■■□□ 2.34
ZNF558-206ENST00000599938 VDRP11473 427 aa29.67■■■□□ 2.34
ZNF558-206ENST00000599938 ERCC5P28715 1186 aaPredicted RBP29.67■■■□□ 2.34
ZNF558-206ENST00000599938 MRE11P49959 708 aa29.67■■■□□ 2.34
ZNF558-206ENST00000599938 CCDC186Q7Z3E2 898 aa29.67■■■□□ 2.34
ZNF558-206ENST00000599938 FAM114A1Q8IWE2 563 aa29.67■■■□□ 2.34
ZNF558-206ENST00000599938 KIAA1958Q8N8K9 716 aa29.67■■■□□ 2.34
ZNF558-206ENST00000599938 ZFHX2Q9C0A1 2572 aaPredicted RBP29.66■■■□□ 2.34
ZNF558-206ENST00000599938 A0A1W2PQH9 124 aa29.66■■■□□ 2.34
ZNF558-206ENST00000599938 SLC9A3R1O14745 358 aaPredicted RBP29.66■■■□□ 2.34
ZNF558-206ENST00000599938 PAEPP09466 180 aa29.66■■■□□ 2.34
ZNF558-206ENST00000599938 SP9P0CG40 484 aa29.66■■■□□ 2.34
ZNF558-206ENST00000599938 HOXD11P31277 338 aaPredicted RBP29.66■■■□□ 2.34
ZNF558-206ENST00000599938 GJA4P35212 333 aa29.66■■■□□ 2.34
ZNF558-206ENST00000599938 NBL1P41271 181 aa29.66■■■□□ 2.34
ZNF558-206ENST00000599938 DGKKQ5KSL6 1271 aa29.66■■■□□ 2.34
ZNF558-206ENST00000599938 ALYREFQ86V81 257 aaKnown RBP29.66■■■□□ 2.34
ZNF558-206ENST00000599938 MAML2Q8IZL2 1156 aaPredicted RBP29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms