RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ATP2A3Q93084 1043 aa23.89■■□□□ 1.41
CCDC9-204ENST00000599398 RBM12Q9NTZ6 932 aaKnown RBP23.89■■□□□ 1.41
CCDC9-204ENST00000599398 FGFR1OPO95684 399 aaKnown RBP23.88■■□□□ 1.41
CCDC9-204ENST00000599398 OLFM2O95897 454 aa23.88■■□□□ 1.41
CCDC9-204ENST00000599398 YWHAEP62258 255 aaKnown RBP23.88■■□□□ 1.41
CCDC9-204ENST00000599398 ZXDBP98169 803 aa23.88■■□□□ 1.41
CCDC9-204ENST00000599398 AMPD2Q01433 879 aa23.88■■□□□ 1.41
CCDC9-204ENST00000599398 CSTF1Q05048 431 aaKnown RBP23.88■■□□□ 1.41
CCDC9-204ENST00000599398 HECTD3Q5T447 861 aa23.88■■□□□ 1.41
CCDC9-204ENST00000599398 GPRIN1Q7Z2K8 1008 aa23.88■■□□□ 1.41
CCDC9-204ENST00000599398 MAML2Q8IZL2 1156 aaPredicted RBP23.88■■□□□ 1.41
CCDC9-204ENST00000599398 CLSTN2Q9H4D0 955 aa23.88■■□□□ 1.41
CCDC9-204ENST00000599398 FAM124BQ9H5Z6 455 aaPredicted RBP23.88■■□□□ 1.41
CCDC9-204ENST00000599398 MYO15AQ9UKN7 3530 aa23.88■■□□□ 1.41
CCDC9-204ENST00000599398 FAM92AA1XBS5 289 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 COCHO43405 550 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 GFRA3O60609 400 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 CCDC192P0DO97 292 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 ACO1P21399 889 aaKnown RBP23.87■■□□□ 1.41
CCDC9-204ENST00000599398 TBXAS1P24557 533 aaPredicted RBP23.87■■□□□ 1.41
CCDC9-204ENST00000599398 EML3Q32P44 896 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 DGKKQ5KSL6 1271 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 NT5C1BQ96P26 610 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 DUSP16Q9BY84 665 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 NACA2Q9H009 215 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 CCSER2Q9H7U1 834 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 ECT2Q9H8V3 914 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 RWDD2AQ9UIY3 292 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 FBXO4Q9UKT5 387 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 R4GN57 208 aa23.87■■□□□ 1.41
CCDC9-204ENST00000599398 HHLA1C9JL84 531 aa23.86■■□□□ 1.41
CCDC9-204ENST00000599398 PROB1E7EW31 1015 aa23.86■■□□□ 1.41
CCDC9-204ENST00000599398 KCNH2Q12809 1159 aa23.86■■□□□ 1.41
CCDC9-204ENST00000599398 SNX30Q5VWJ9 437 aa23.86■■□□□ 1.41
CCDC9-204ENST00000599398 ZC3H14Q6PJT7 736 aaKnown RBP23.86■■□□□ 1.41
CCDC9-204ENST00000599398 DDX42Q86XP3 938 aaKnown RBP eCLIP23.86■■□□□ 1.41
CCDC9-204ENST00000599398 CREBRFQ8IUR6 639 aa23.86■■□□□ 1.41
CCDC9-204ENST00000599398 TRIM59Q8IWR1 403 aa23.86■■□□□ 1.41
CCDC9-204ENST00000599398 NKD2Q969F2 451 aaPredicted RBP23.86■■□□□ 1.41
CCDC9-204ENST00000599398 IER2Q9BTL4 223 aa23.86■■□□□ 1.41
CCDC9-204ENST00000599398 LINC00597Q9H2U6 94 aa23.86■■□□□ 1.41
CCDC9-204ENST00000599398 PNPLA8Q9NP80 782 aa23.86■■□□□ 1.41
CCDC9-204ENST00000599398 TLR8Q9NR97 1041 aaKnown RBP23.86■■□□□ 1.41
CCDC9-204ENST00000599398 CFAP97Q9P2B7 532 aa23.86■■□□□ 1.41
CCDC9-204ENST00000599398 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.86■■□□□ 1.41
CCDC9-204ENST00000599398 USP34Q70CQ2 3546 aa23.85■■□□□ 1.41
CCDC9-204ENST00000599398 SCAMP3O14828 347 aaKnown RBP23.85■■□□□ 1.41
CCDC9-204ENST00000599398 PMM2O15305 246 aa23.85■■□□□ 1.41
CCDC9-204ENST00000599398 ZDHHC11BP0C7U3 371 aa23.85■■□□□ 1.41
CCDC9-204ENST00000599398 TUBP50607 506 aa23.85■■□□□ 1.41
CCDC9-204ENST00000599398 GRSF1Q12849 480 aaKnown RBP eCLIP23.85■■□□□ 1.41
CCDC9-204ENST00000599398 NR1H3Q13133 447 aa23.85■■□□□ 1.41
CCDC9-204ENST00000599398 TSSK4Q6SA08 328 aa23.85■■□□□ 1.41
CCDC9-204ENST00000599398 PPM1KQ8N3J5 372 aa23.85■■□□□ 1.41
CCDC9-204ENST00000599398 SCML2Q9UQR0 700 aa23.85■■□□□ 1.41
CCDC9-204ENST00000599398 ATG2BQ96BY7 2078 aa23.85■■□□□ 1.41
CCDC9-204ENST00000599398 P4HA2O15460 535 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 CYP26A1O43174 497 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 NFATC1O95644 943 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 AFPP02771 609 aaKnown RBP23.84■■□□□ 1.41
CCDC9-204ENST00000599398 CD19P15391 556 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 GJA4P35212 333 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 PGFP49763 221 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 MARSP56192 900 aaKnown RBP23.84■■□□□ 1.41
CCDC9-204ENST00000599398 SLC8A3P57103 927 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 ZNF528Q3MIS6 628 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 ARHGAP17Q68EM7 881 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 CLEC17AQ6ZS10 378 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 Q6ZS52 159 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 MLKLQ8NB16 471 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 NUP62CLQ9H1M0 184 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 FANCMQ8IYD8 2048 aa23.84■■□□□ 1.41
CCDC9-204ENST00000599398 SLC9A3R1O14745 358 aaPredicted RBP23.83■■□□□ 1.41
CCDC9-204ENST00000599398 TLR5O60602 858 aa23.83■■□□□ 1.41
CCDC9-204ENST00000599398 CCR3P51677 355 aa23.83■■□□□ 1.41
CCDC9-204ENST00000599398 KIF11P52732 1056 aa23.83■■□□□ 1.41
CCDC9-204ENST00000599398 CCINQ13939 588 aa23.83■■□□□ 1.41
CCDC9-204ENST00000599398 PPP2R5DQ14738 602 aa23.83■■□□□ 1.41
CCDC9-204ENST00000599398 SGO2Q562F6 1265 aa23.83■■□□□ 1.41
CCDC9-204ENST00000599398 EXOC4Q96A65 974 aa23.83■■□□□ 1.41
CCDC9-204ENST00000599398 CHFRQ96EP1 664 aa23.83■■□□□ 1.41
CCDC9-204ENST00000599398 P2RY13Q9BPV8 354 aa23.83■■□□□ 1.41
CCDC9-204ENST00000599398 PRMT8Q9NR22 394 aaPredicted RBP23.83■■□□□ 1.41
CCDC9-204ENST00000599398 RIF1Q5UIP0 2472 aaKnown RBP23.83■■□□□ 1.4
CCDC9-204ENST00000599398 DMDP11532 3685 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 TRDMT1O14717 391 aaKnown RBP23.82■■□□□ 1.4
CCDC9-204ENST00000599398 GAS6Q14393 721 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 TPD52L1Q16890 204 aaPredicted RBP23.82■■□□□ 1.4
CCDC9-204ENST00000599398 GOLGA7BQ2TAP0 167 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 TMEM196Q5HYL7 178 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 NAIF1Q69YI7 327 aaPredicted RBP23.82■■□□□ 1.4
CCDC9-204ENST00000599398 TMEM270Q6UE05 265 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 ASCL5Q7RTU5 278 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 SPEM1Q8N4L4 309 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 ANKRD52Q8NB46 1076 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 EHBP1Q8NDI1 1231 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 CNOT6LQ96LI5 555 aaKnown RBP23.82■■□□□ 1.4
CCDC9-204ENST00000599398 GBP4Q96PP9 640 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 LMBRD1Q9NUN5 540 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 HESX1Q9UBX0 185 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms