RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 TCF3P15923 654 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 ACO1P21399 889 aaKnown RBP14.94□□□□□ -0.02
LIG1-218ENST00000599322 PSEN1P49768 467 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 CACNA2D1P54289 1103 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 SLC7A9P82251 487 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 TNK2Q07912 1038 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 SGO2Q562F6 1265 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 PPM1KQ8N3J5 372 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 SYNPOQ8N3V7 929 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 CCDC26Q8TAB7 109 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 TATDN2Q93075 761 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 FAM81BQ96LP2 452 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 CDK5RAP1Q96SZ6 601 aaKnown RBP14.94□□□□□ -0.02
LIG1-218ENST00000599322 SMOQ99835 787 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 DUSP16Q9BY84 665 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 DLGAP2Q9P1A6 1054 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 TBC1D14Q9P2M4 693 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 FBXO4Q9UKT5 387 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 SH3BP1Q9Y3L3 701 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 CPQQ9Y646 472 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 NUP210Q8TEM1 1887 aaPredicted RBP14.94□□□□□ -0.02
LIG1-218ENST00000599322 LEFTY2O00292 366 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 RALAP11233 206 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 BMP6P22004 513 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 TUBP50607 506 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 CCR3P51677 355 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 NRLP54845 237 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 CSTF1Q05048 431 aaKnown RBP14.93□□□□□ -0.02
LIG1-218ENST00000599322 KCNH2Q12809 1159 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 USP4Q13107 963 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 ZNF77Q15935 545 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 ARHGAP18Q8N392 663 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 SCAMP5Q8TAC9 235 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 TWNKQ96RR1 684 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 SLC22A12Q96S37 553 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 SMPD4Q9NXE4 827 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 PCDHB4Q9Y5E5 795 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 WDR87Q6ZQQ6 2873 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 GVINP1Q7Z2Y8 2422 aa14.93□□□□□ -0.02
LIG1-218ENST00000599322 DMXL1Q9Y485 3027 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 TNFRSF10BO14763 440 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 ATG13O75143 517 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 VDRP11473 427 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 PRKCSHP14314 528 aaPredicted RBP14.92□□□□□ -0.02
LIG1-218ENST00000599322 ATP5C1P36542 298 aaKnown RBP14.92□□□□□ -0.02
LIG1-218ENST00000599322 MTIF2P46199 727 aaKnown RBP14.92□□□□□ -0.02
LIG1-218ENST00000599322 CXCL12P48061 93 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 SOX9P48436 509 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 RAD23BP54727 409 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 MARSP56192 900 aaKnown RBP14.92□□□□□ -0.02
LIG1-218ENST00000599322 PON2Q15165 354 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 ZNF528Q3MIS6 628 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 PPP1R26Q5T8A7 1209 aaPredicted RBP14.92□□□□□ -0.02
LIG1-218ENST00000599322 SNX30Q5VWJ9 437 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 ARHGAP17Q68EM7 881 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 TRIM68Q6AZZ1 485 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 CLEC17AQ6ZS10 378 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 CLEC20AQ6ZU45 233 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 TRIM59Q8IWR1 403 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 SLC4A11Q8NBS3 891 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 EHBP1Q8NDI1 1231 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 WHAMMQ8TF30 809 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 ATRIPQ8WXE1 791 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 IPO9Q96P70 1041 aaKnown RBP14.92□□□□□ -0.02
LIG1-218ENST00000599322 FAM126AQ9BYI3 521 aaPredicted RBP14.92□□□□□ -0.02
LIG1-218ENST00000599322 UBXN6Q9BZV1 441 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 CHRDQ9H2X0 955 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 ECT2Q9H8V3 914 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 IL37Q9NZH6 218 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 GMIPQ9P107 970 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 CFAP97Q9P2B7 532 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 LSM7Q9UK45 103 aaKnown RBP14.92□□□□□ -0.02
LIG1-218ENST00000599322 SCML2Q9UQR0 700 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 WNT6Q9Y6F9 365 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 ZNF638Q14966 1978 aaKnown RBP14.92□□□□□ -0.02
LIG1-218ENST00000599322 ZNF292O60281 2723 aa14.92□□□□□ -0.02
LIG1-218ENST00000599322 FAM92AA1XBS5 289 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 TLR5O60602 858 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 BEST1O76090 585 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 OAS1P00973 400 aaKnown RBP14.91□□□□□ -0.02
LIG1-218ENST00000599322 PAEPP09466 180 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 SP9P0CG40 484 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 ARSAP15289 507 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 DRD1P21728 446 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 STILQ15468 1287 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 PREPLQ4J6C6 727 aaPredicted RBP14.91□□□□□ -0.02
LIG1-218ENST00000599322 CT47A1Q5JQC4 288 aaPredicted RBP14.91□□□□□ -0.02
LIG1-218ENST00000599322 TMEM270Q6UE05 265 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 NUDT18Q6ZVK8 323 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 ANKRD52Q8NB46 1076 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 OTUB2Q96DC9 234 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 P2RY13Q9BPV8 354 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 RNF38Q9H0F5 515 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 LRRC4Q9HBW1 653 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 HPS4Q9NQG7 708 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 TMEM30AQ9NV96 361 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 NAGPAQ9UK23 515 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 COL4A2P08572 1712 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 FRYLO94915 3013 aa14.91□□□□□ -0.02
LIG1-218ENST00000599322 E2F8A0AVK6 867 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms