RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.76□□□□□ -0.37
SHKBP1-213ENST00000597325 HERC2P3Q9BVR0 1158 aa12.76□□□□□ -0.37
SHKBP1-213ENST00000597325 OXCT2Q9BYC2 517 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-213ENST00000597325 NHEJ1Q9H9Q4 299 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-213ENST00000597325 ARHGAP20Q9P2F6 1191 aa12.76□□□□□ -0.37
SHKBP1-213ENST00000597325 CDH9Q9ULB4 789 aa12.76□□□□□ -0.37
SHKBP1-213ENST00000597325 TENM4Q6N022 2769 aa12.76□□□□□ -0.37
SHKBP1-213ENST00000597325 TMEM8BA6NDV4 472 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 SOWAHDA6NJG2 315 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 OR6C75A6NL08 312 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 ARHGAP6O43182 974 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 ATP8B3O60423 1300 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 OAZ2O95190 189 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 SOD2P04179 222 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 PLEKP08567 350 aaPredicted RBP12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 TNFAIP3P21580 790 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 BRD2P25440 801 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 LMO2P25791 158 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 CA8P35219 290 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 EIF4A3P38919 411 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 GLUD2P49448 558 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 CLCN4P51793 760 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 PSMC1P62191 440 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 MAPK8IP2Q13387 824 aaPredicted RBP12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 HTR4Q13639 388 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 BMS1Q14692 1282 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 MAPRE1Q15691 268 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 HGSNATQ68CP4 663 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 TRIM72Q6ZMU5 477 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 CCDC170Q8IYT3 715 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 CELF5Q8N6W0 485 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 CMASQ8NFW8 434 aaPredicted RBP12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 SLC20A1Q8WUM9 679 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 CLDN23Q96B33 292 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 B3GALT6Q96L58 329 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 AGPAT1Q99943 283 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 ACBD6Q9BR61 282 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 RHOBTB2Q9BYZ6 727 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 DPEP3Q9H4B8 488 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 ACP6Q9NPH0 428 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 FAM49BQ9NUQ9 324 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 NOCTQ9UK39 431 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 CEP83Q9Y592 693 aa12.75□□□□□ -0.37
SHKBP1-213ENST00000597325 CLUHO75153 1309 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 FAM170BA6NMN3 283 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 CYSRT1A8MQ03 144 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 HCRTO43612 131 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 CALCAP01258 141 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 PTPN1P18031 435 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 KIF11P52732 1056 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 CCZ1BP86790 482 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 CCZ1P86791 482 aaPredicted RBP12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 CREMQ03060 361 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 SPA17Q15506 151 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 PSMD5Q16401 504 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 SOWAHCQ53LP3 525 aaPredicted RBP12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 MDH1BQ5I0G3 518 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 INTS6LQ5JSJ4 861 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 RTP2Q5QGT7 225 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 IL31Q6EBC2 164 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 ZNF571Q7Z3V5 609 aaPredicted RBP12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 TMEM139Q8IV31 216 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 RNF168Q8IYW5 571 aaPredicted RBP12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 DCP1BQ8IZD4 617 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 CRYBG2Q8N1P7 616 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 ZNF606Q8WXB4 792 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 CHP1Q99653 195 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 MED10Q9BTT4 135 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 LUC7LQ9NQ29 371 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 HESX1Q9UBX0 185 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 RAB23Q9ULC3 237 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 SSX2IPQ9Y2D8 614 aa12.74□□□□□ -0.37
SHKBP1-213ENST00000597325 M0QYV0 167 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 C2CD2LO14523 706 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 PAPLNO95428 1278 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 EFEMP2O95967 443 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 MMEP08473 750 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 LAMP2P13473 410 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 CPB1P15086 417 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 SLC8A3P57103 927 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 GPC5P78333 572 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 CYP27A1Q02318 531 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 DSG1Q02413 1049 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 PRKCQQ04759 706 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 FZD5Q13467 585 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 UBXN2BQ14CS0 331 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 GOLGA7BQ2TAP0 167 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 HS1BP3Q53T59 392 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 ARHGAP17Q68EM7 881 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 TAS1R1Q7RTX1 841 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 GLYCTKQ8IVS8 523 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 OR10T2Q8NGX3 314 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 MYCBPAPQ8TBZ2 947 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 PIK3R5Q8WYR1 880 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 TFAP2BQ92481 460 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 GATA6Q92908 595 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 ZNF830Q96NB3 372 aaPredicted RBP12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 RPP25Q9BUL9 199 aaKnown RBP12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 VN1R3Q9BXE9 311 aa12.73□□□□□ -0.37
SHKBP1-213ENST00000597325 KCNF1Q9H3M0 494 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms