RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 BNC1Q01954 994 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 SYCP2LQ5T4T6 812 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 KRT79Q5XKE5 535 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 EGFLAMQ63HQ2 1017 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 TRMT11Q7Z4G4 463 aaKnown RBP16.55■□□□□ 0.24
LIG1-214ENST00000597146 SPATA2LQ8IUW3 424 aaPredicted RBP16.55■□□□□ 0.24
LIG1-214ENST00000597146 GALNT15Q8N3T1 639 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 ZNF560Q96MR9 790 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 FCRL3Q96P31 734 aaPredicted RBP16.55■□□□□ 0.24
LIG1-214ENST00000597146 ACOX2Q99424 681 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 ACBD6Q9BR61 282 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 ZDHHC5Q9C0B5 715 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 TM7SF3Q9NS93 570 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 BTBD3Q9Y2F9 522 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 PTPN13Q12923 2485 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 VPS37CA5D8V6 355 aaPredicted RBP16.54■□□□□ 0.24
LIG1-214ENST00000597146 MEI4A8MW99 385 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 K7ENM7 598 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 SLC9A3R1O14745 358 aaPredicted RBP16.54■□□□□ 0.24
LIG1-214ENST00000597146 TOB1P50616 345 aaPredicted RBP16.54■□□□□ 0.24
LIG1-214ENST00000597146 CFAP221Q4G0U5 840 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 CCDC157Q569K6 752 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 SCARA3Q6AZY7 606 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 ETFBKMTQ8IXQ9 262 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 PDCD7Q8N8D1 485 aaKnown RBP16.54■□□□□ 0.24
LIG1-214ENST00000597146 RHBDD1Q8TEB9 315 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
LIG1-214ENST00000597146 ASB7Q9H672 318 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 TRPM5Q9NZQ8 1165 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 RAD54BQ9Y620 910 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 MYLKQ15746 1914 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 KNTC1P50748 2209 aa16.54■□□□□ 0.24
LIG1-214ENST00000597146 MYH10P35580 1976 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 A0A1B0GTW7 788 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 TULP3O75386 442 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 OLFM2O95897 454 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 NTSR1P30989 418 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 MYL7Q01449 175 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 IL17AQ16552 155 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 WDR45BQ5MNZ6 344 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 KIAA1324Q6UXG2 1013 aaKnown RBP16.53■□□□□ 0.24
LIG1-214ENST00000597146 TERB1Q8NA31 727 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 FOXJ1Q92949 421 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 CDK5RAP3Q96JB5 506 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 FAM84AQ96KN4 292 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 PLIN2Q99541 437 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 MIR1-1HGQ9H1L0 117 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 KCNG1Q9UIX4 513 aa16.53■□□□□ 0.24
LIG1-214ENST00000597146 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.53■□□□□ 0.24
LIG1-214ENST00000597146 ZNF840PA6NDX5 716 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 ANKRD63C9JTQ0 380 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 H0YCG3 227 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 PYCARD-AS1I3L0S3 204 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 PLK4O00444 970 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 FLRT2O43155 660 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 TLX3O43711 291 aaPredicted RBP16.52■□□□□ 0.24
LIG1-214ENST00000597146 CER1O95813 267 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 ABL1P00519 1130 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 HSP90AA1P07900 732 aaKnown RBP16.52■□□□□ 0.24
LIG1-214ENST00000597146 ZNF883P0CG24 379 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 POLR2BP30876 1174 aaKnown RBP16.52■□□□□ 0.24
LIG1-214ENST00000597146 MATKP42679 507 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 SLC12A3P55017 1021 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 WNT7BP56706 349 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 HLA-BQ31612 363 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 PCSK4Q6UW60 755 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 SYT2Q8N9I0 419 aaPredicted RBP16.52■□□□□ 0.24
LIG1-214ENST00000597146 MYLPFQ96A32 169 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 FUBP3Q96I24 572 aaKnown RBP eCLIP16.52■□□□□ 0.24
LIG1-214ENST00000597146 MRGPRX1Q96LB2 322 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 CDC6Q99741 560 aa16.52■□□□□ 0.24
LIG1-214ENST00000597146 LARSQ9P2J5 1176 aaKnown RBP16.52■□□□□ 0.24
LIG1-214ENST00000597146 ATP2C2O75185 946 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 OAS1P00973 400 aaKnown RBP16.51■□□□□ 0.23
LIG1-214ENST00000597146 MBL2P11226 248 aaPredicted RBP16.51■□□□□ 0.23
LIG1-214ENST00000597146 PFKLP17858 780 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 PRPHP41219 470 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 MAGEA11P43364 429 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 CLDN6P56747 220 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 PSMC1P62191 440 aaKnown RBP16.51■□□□□ 0.23
LIG1-214ENST00000597146 GAD2Q05329 585 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 SMAD1Q15797 465 aaKnown RBP16.51■□□□□ 0.23
LIG1-214ENST00000597146 DHRS13Q6UX07 377 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 DENND5BQ6ZUT9 1274 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 CHPFQ8IZ52 775 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 KIAA1958Q8N8K9 716 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 KCNV2Q8TDN2 545 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 KCNN1Q92952 543 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 IKZF4Q9H2S9 585 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.51■□□□□ 0.23
LIG1-214ENST00000597146 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 DEC1Q9P2X7 70 aa16.51■□□□□ 0.23
LIG1-214ENST00000597146 COL5A1P20908 1838 aaPredicted RBP16.51■□□□□ 0.23
LIG1-214ENST00000597146 TULP1O00294 542 aaPredicted RBP16.5■□□□□ 0.23
LIG1-214ENST00000597146 ZBTB24O43167 697 aaPredicted RBP16.5■□□□□ 0.23
LIG1-214ENST00000597146 HUS1O60921 280 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 ITGB3P05106 788 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 NCAM1P13591 858 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 HLA-EP13747 358 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 BDNFP23560 247 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms