RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 TNK2Q07912 1038 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 FZD5Q13467 585 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 UBXN2BQ14CS0 331 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 SGO2Q562F6 1265 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 HECTD3Q5T447 861 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 TMEM270Q6UE05 265 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 TTC30AQ86WT1 665 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 DTWD2Q8NBA8 298 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 ENOX1Q8TC92 643 aaKnown RBP22.26■■□□□ 1.15
PNKP-209ENST00000596726 SH3RF2Q8TEC5 729 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 JAKMIP2Q96AA8 810 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 HPS4Q9NQG7 708 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 CNTN6Q9UQ52 1028 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 MRPS17Q9Y2R5 130 aaKnown RBP22.26■■□□□ 1.15
PNKP-209ENST00000596726 PCDHB4Q9Y5E5 795 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 USP3Q9Y6I4 520 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 ZNF132P52740 706 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 RUNX3Q13761 415 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 MAN2A1Q16706 1144 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 ITPRIPL2Q3MIP1 535 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 CCDC183Q5T5S1 534 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 TRIM68Q6AZZ1 485 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 CC2D1AQ6P1N0 951 aaPredicted RBP22.25■■□□□ 1.15
PNKP-209ENST00000596726 TRIM65Q6PJ69 517 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 GBP6Q6ZN66 633 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 KIAA1958Q8N8K9 716 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 FAM3CQ92520 227 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 CLDN23Q96B33 292 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 CRACR2AQ9BSW2 395 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 TLR8Q9NR97 1041 aaKnown RBP22.25■■□□□ 1.15
PNKP-209ENST00000596726 TSPAN16Q9UKR8 245 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 CPQQ9Y646 472 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 CACNA1HO95180 2353 aa22.25■■□□□ 1.15
PNKP-209ENST00000596726 SPECC1L-ADORA2AF8WAN1 911 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 LEFTY2O00292 366 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 O00370 1275 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 COCHO43405 550 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 CD19P15391 556 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 SLC9A1P19634 815 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 CTHP32929 405 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 SOX9P48436 509 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 KPNA1P52294 538 aaPredicted RBP22.24■■□□□ 1.15
PNKP-209ENST00000596726 PTPN5P54829 565 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 PDGFRLQ15198 375 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 GOLGA7BQ2TAP0 167 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 RAB41Q5JT25 222 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 MIIPQ5JXC2 388 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 C1orf228Q6PIY5 440 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 PIGZQ86VD9 579 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 RALGPS2Q86X27 583 aaPredicted RBP22.24■■□□□ 1.15
PNKP-209ENST00000596726 OSCP1Q8WVF1 389 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 TFAP2BQ92481 460 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 EBF3Q9H4W6 596 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 CCSER2Q9H7U1 834 aa22.24■■□□□ 1.15
PNKP-209ENST00000596726 UBE2TQ9NPD8 197 aaPredicted RBP22.24■■□□□ 1.15
PNKP-209ENST00000596726 SAMSN1Q9NSI8 373 aaKnown RBP22.24■■□□□ 1.15
PNKP-209ENST00000596726 CACNA1IQ9P0X4 2223 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 OTOL1A6NHN0 477 aaPredicted RBP22.23■■□□□ 1.15
PNKP-209ENST00000596726 CYP26A1O43174 497 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 MBL2P11226 248 aaPredicted RBP22.23■■□□□ 1.15
PNKP-209ENST00000596726 ARSAP15289 507 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 BCAT1P54687 386 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 EXOC3L4Q17RC7 722 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 PKDCCQ504Y2 493 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 TXNDC11Q6PKC3 985 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 SASS6Q6UVJ0 657 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 CCDC186Q7Z3E2 898 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 RBBP8NLQ8NC74 664 aaPredicted RBP22.23■■□□□ 1.15
PNKP-209ENST00000596726 TTC8Q8TAM2 541 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 ZFRQ96KR1 1074 aaKnown RBP22.23■■□□□ 1.15
PNKP-209ENST00000596726 ZSWIM1Q9BR11 485 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 TUBGCP2Q9BSJ2 902 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 NDST4Q9H3R1 872 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 NMUR1Q9HB89 426 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 OSER1Q9NX31 292 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 TMEM63CQ9P1W3 806 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 NFE2L3Q9Y4A8 694 aa22.23■■□□□ 1.15
PNKP-209ENST00000596726 KCNJ18B7U540 433 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 XPO1O14980 1071 aaKnown RBP22.22■■□□□ 1.15
PNKP-209ENST00000596726 NCAM2O15394 837 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 PON1P27169 355 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 MAGEA9P43362 315 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 RPS9P46781 194 aaKnown RBP22.22■■□□□ 1.15
PNKP-209ENST00000596726 SLC8A3P57103 927 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 PDE4CQ08493 712 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 KCNJ12Q14500 433 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 CNGA2Q16280 664 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 EML3Q32P44 896 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 VWA3BQ502W6 1294 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 HSP90AA4PQ58FG1 418 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 LCLAT1Q6UWP7 414 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 ENOSF1Q7L5Y1 443 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 ZNF276Q8N554 614 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 FAM81BQ96LP2 452 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 CYLDQ9NQC7 956 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 ANO10Q9NW15 660 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 DUS2Q9NX74 493 aaKnown RBP22.22■■□□□ 1.15
PNKP-209ENST00000596726 SMPD4Q9NXE4 827 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 HESX1Q9UBX0 185 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 NDRG2Q9UN36 371 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms