RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ZDHHC4Q9NPG8 344 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 TMEM9BQ9NQ34 198 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 ARHGEF4Q9NR80 690 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 TBC1D14Q9P2M4 693 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 CHORDC1Q9UHD1 332 aaPredicted RBP11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 SH3BP1Q9Y3L3 701 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 LNP1A1A4G5 178 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 SGK1O00141 431 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 GIPC1O14908 333 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 ATP8B3O60423 1300 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 EXOC3O60645 756 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 CUTAO60888 179 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 UBE4BO95155 1302 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 OLFM2O95897 454 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 HNRNPLP14866 589 aaKnown RBP eCLIP11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 ATICP31939 592 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 EIF2DP41214 584 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 SNRPFP62306 86 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 IRX4P78413 519 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 GAD2Q05329 585 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 BIRC3Q13489 604 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 HSF5Q4G112 596 aaPredicted RBP11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 HECTD3Q5T447 861 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 SH3PXD2AQ5TCZ1 1133 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 BTBD8Q5XKL5 378 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 UNC13DQ70J99 1090 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 LPCAT2Q7L5N7 544 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 C12orf40Q86WS4 652 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 SFTPA1Q8IWL2 248 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 NAT16Q8N8M0 369 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 IL17RCQ8NAC3 791 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 PDZD8Q8NEN9 1154 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 WHAMMQ8TF30 809 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 SCFD1Q8WVM8 642 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 HMGB4Q8WW32 186 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 SPACA7Q96KW9 195 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 KCNK16Q96T55 309 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 C7orf25Q9BPX7 421 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 BLZF1Q9H2G9 400 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 TMEM30AQ9NV96 361 aa11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 KMT2BQ9UMN6 2715 aaPredicted RBP11.22□□□□□ -0.61
CHMP2A-202ENST00000596708 CHD8Q9HCK8 2581 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 E2F8A0AVK6 867 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 TBC1D3BA6NDS4 549 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 POLR2DO15514 142 aaKnown RBP11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 STAU1O95793 577 aaKnown RBP11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 CASP1P29466 404 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 GRIA2P42262 883 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 TNFRSF4P43489 277 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 CASP4P49662 377 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 CDH8P55286 799 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 ZNF252P-AS1Q0IIN9 211 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 MESP2Q0VG99 397 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 FOXC1Q12948 553 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 BYSLQ13895 437 aaKnown RBP11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 ZNF667Q5HYK9 610 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 LY6G5CQ5SRR4 150 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 FOXD4L5Q5VV16 416 aaPredicted RBP11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 SHC4Q6S5L8 630 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 ARMCX6Q7L4S7 300 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 TMEFF1Q8IYR6 380 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 FRMD1Q8N878 549 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 FOXD4L4Q8WXT5 416 aaPredicted RBP11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 OVCA2Q8WZ82 227 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 NUSAP1Q9BXS6 441 aaKnown RBP11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 NACA2Q9H009 215 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 SLC39A2Q9NP94 309 aa11.21□□□□□ -0.61
CHMP2A-202ENST00000596708 A0A0A0MRY4 1105 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 TCRBV21S2A2A0A5A6 115 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 CDX4O14627 284 aaPredicted RBP11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 COCHO43405 550 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 AP1G2O75843 785 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 YEATS4O95619 227 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 IRF1P10914 325 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 P2RY2P41231 377 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 KIR2DL1P43626 348 aaPredicted RBP11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 AFMP43652 599 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 ANO4Q32M45 955 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 ZNF699Q32M78 642 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 FOXD4L6Q3SYB3 417 aaPredicted RBP11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 PREPLQ4J6C6 727 aaPredicted RBP11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 TRIM61Q5EBN2 209 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 CNNM4Q6P4Q7 775 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 FOXD4L3Q6VB84 417 aaPredicted RBP11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 SCARA5Q6ZMJ2 495 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 NUDT18Q6ZVK8 323 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 FAM35AQ86V20 835 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 SCAMP5Q8TAC9 235 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 OLIG1Q8TAK6 271 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 OTUB2Q96DC9 234 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 TNIP3Q96KP6 325 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 XYLT2Q9H1B5 865 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 SMYD3Q9H7B4 428 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 CCSER2Q9H7U1 834 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 MAGEF1Q9HAY2 307 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 DMAP1Q9NPF5 467 aaPredicted RBP11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 FAM13BQ9NYF5 915 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 CGNQ9P2M7 1197 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms