RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 TNNI1P19237 187 aa19.81■□□□□ 0.76
PDE4C-208ENST00000595343 TNFRSF4P43489 277 aa19.81■□□□□ 0.76
PDE4C-208ENST00000595343 IFRD2Q12894 506 aaPredicted RBP19.81■□□□□ 0.76
PDE4C-208ENST00000595343 SNRNP35Q16560 246 aaKnown RBP19.81■□□□□ 0.76
PDE4C-208ENST00000595343 WDR72Q3MJ13 1102 aa19.81■□□□□ 0.76
PDE4C-208ENST00000595343 SYT12Q8IV01 421 aa19.81■□□□□ 0.76
PDE4C-208ENST00000595343 RDH13Q8NBN7 331 aa19.81■□□□□ 0.76
PDE4C-208ENST00000595343 HMGB4Q8WW32 186 aa19.81■□□□□ 0.76
PDE4C-208ENST00000595343 USP28Q96RU2 1077 aa19.81■□□□□ 0.76
PDE4C-208ENST00000595343 CGRRF1Q99675 332 aa19.81■□□□□ 0.76
PDE4C-208ENST00000595343 NUSAP1Q9BXS6 441 aaKnown RBP19.81■□□□□ 0.76
PDE4C-208ENST00000595343 TBC1D14Q9P2M4 693 aa19.81■□□□□ 0.76
PDE4C-208ENST00000595343 E2F8A0AVK6 867 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.8■□□□□ 0.76
PDE4C-208ENST00000595343 CLDN5O00501 218 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 SYT1P21579 422 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 YWHAQP27348 245 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 TNNC1P63316 161 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 BYSLQ13895 437 aaKnown RBP19.8■□□□□ 0.76
PDE4C-208ENST00000595343 MAP7D1Q3KQU3 841 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 LY6G5CQ5SRR4 150 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 NUP93Q8N1F7 819 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 PHTF2Q8N3S3 785 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 B3GALNT2Q8NCR0 500 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 ZFRQ96KR1 1074 aaKnown RBP19.8■□□□□ 0.76
PDE4C-208ENST00000595343 SCNM1Q9BWG6 230 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 B3GNT5Q9BYG0 378 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 TNMDQ9H2S6 317 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 AKAP13Q12802 2813 aa19.8■□□□□ 0.76
PDE4C-208ENST00000595343 ZFYVE26Q68DK2 2539 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 TNRC6BQ9UPQ9 1833 aaKnown RBP19.79■□□□□ 0.76
PDE4C-208ENST00000595343 MYO18AQ92614 2054 aaKnown RBP19.79■□□□□ 0.76
PDE4C-208ENST00000595343 ASPMQ8IZT6 3477 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 TCRBV21S2A2A0A5A6 115 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 A8MXQ7 604 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 EIF3DO15371 548 aaKnown RBP eCLIP19.79■□□□□ 0.76
PDE4C-208ENST00000595343 MAPK8P45983 427 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 GAD2Q05329 585 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 CYP24A1Q07973 514 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 PSMD6Q15008 389 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 SPDYCQ5MJ68 293 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 EPM2AIP1Q7L775 607 aaPredicted RBP19.79■□□□□ 0.76
PDE4C-208ENST00000595343 PGBD3Q8N328 593 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 PDZD8Q8NEN9 1154 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 ZNF507Q8TCN5 953 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 OVCA2Q8WZ82 227 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 CCDC127Q96BQ5 260 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 OTUB2Q96DC9 234 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 TRIM9Q9C026 710 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 LRRC27Q9C0I9 530 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 AGPAT3Q9NRZ7 376 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 KBTBD4Q9NVX7 518 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 PI4KAP42356 2102 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 CACNA1EQ15878 2313 aa19.79■□□□□ 0.76
PDE4C-208ENST00000595343 ATXN2Q99700 1313 aaKnown RBP19.78■□□□□ 0.76
PDE4C-208ENST00000595343 TGFB1I1O43294 461 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 COCHO43405 550 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 RTN3O95197 1032 aaPredicted RBP19.78■□□□□ 0.76
PDE4C-208ENST00000595343 ENGP17813 658 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 DPP6P42658 865 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 CYP2J2P51589 502 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 LYSMD4Q5XG99 296 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 SLC23A3Q6PIS1 610 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 ETFBKMTQ8IXQ9 262 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 NAT16Q8N8M0 369 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 ZNF516Q92618 1163 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 GATA6Q92908 595 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 FBXO32Q969P5 355 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 KCNK16Q96T55 309 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 SLC32A1Q9H598 525 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 NXF1Q9UBU9 619 aaKnown RBP19.78■□□□□ 0.76
PDE4C-208ENST00000595343 CHORDC1Q9UHD1 332 aaPredicted RBP19.78■□□□□ 0.76
PDE4C-208ENST00000595343 PILRBQ9UKJ0 227 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 PLXND1Q9Y4D7 1925 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 PCNX2A6NKB5 2137 aa19.78■□□□□ 0.76
PDE4C-208ENST00000595343 ATRXP46100 2492 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 TBC1D3BA6NDS4 549 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 TMEM8BA6NDV4 472 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 CLIC2O15247 247 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 STAU1O95793 577 aaKnown RBP19.77■□□□□ 0.76
PDE4C-208ENST00000595343 ITPKAP23677 461 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 MYL6P60660 151 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 TRPC3Q13507 836 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 E2F4Q16254 413 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 HECTD3Q5T447 861 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 PEAR1Q5VY43 1037 aaPredicted RBP19.77■□□□□ 0.76
PDE4C-208ENST00000595343 BTBD8Q5XKL5 378 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 XXYLT1Q8NBI6 393 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 SCAMP5Q8TAC9 235 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 GZF1Q9H116 711 aaPredicted RBP19.77■□□□□ 0.76
PDE4C-208ENST00000595343 XYLT2Q9H1B5 865 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 SH3BP1Q9Y3L3 701 aa19.77■□□□□ 0.76
PDE4C-208ENST00000595343 HOXC11O43248 304 aaPredicted RBP19.76■□□□□ 0.75
PDE4C-208ENST00000595343 TULP3O75386 442 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 CFIP05156 583 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 ATICP31939 592 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 HOXD12P35452 270 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 NASPP49321 788 aaPredicted RBP19.76■□□□□ 0.75
PDE4C-208ENST00000595343 ASIC1P78348 528 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 FAM26FQ5R3K3 315 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms