RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 SFTPA1Q8IWL2 248 aa13.28□□□□□ -0.28
UPF1-203ENST00000594504 ADGRG2Q8IZP9 1017 aa13.28□□□□□ -0.28
UPF1-203ENST00000594504 CCDC33Q8N5R6 958 aa13.28□□□□□ -0.28
UPF1-203ENST00000594504 C12orf50Q8NA57 414 aaPredicted RBP13.28□□□□□ -0.28
UPF1-203ENST00000594504 DHTKD1Q96HY7 919 aaPredicted RBP13.28□□□□□ -0.28
UPF1-203ENST00000594504 KCNK16Q96T55 309 aa13.28□□□□□ -0.28
UPF1-203ENST00000594504 TSG101Q99816 390 aa13.28□□□□□ -0.28
UPF1-203ENST00000594504 TTLL2Q9BWV7 592 aa13.28□□□□□ -0.28
UPF1-203ENST00000594504 ZNF518BQ9C0D4 1074 aa13.28□□□□□ -0.28
UPF1-203ENST00000594504 NUP62CLQ9H1M0 184 aa13.28□□□□□ -0.28
UPF1-203ENST00000594504 CPQQ9Y646 472 aa13.28□□□□□ -0.28
UPF1-203ENST00000594504 MYOFQ9NZM1 2061 aa13.27□□□□□ -0.28
UPF1-203ENST00000594504 TRIM66O15016 1216 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 TACC1O75410 805 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 KRT37O76014 449 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 TCF3P15923 654 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 BMP6P22004 513 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 DGKEP52429 567 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 TNNC1P63316 161 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 MESP2Q0VG99 397 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 ADAM9Q13443 819 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 TRPC3Q13507 836 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 PLA2G2CQ5R387 149 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 EMC10Q5UCC4 262 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 TCEAL6Q6IPX3 200 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 TMC2Q8TDI7 906 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 PARD3BQ8TEW8 1205 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 USP33Q8TEY7 942 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 TCEAL3Q969E4 200 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 LOXL4Q96JB6 756 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 ZC3H10Q96K80 434 aaKnown RBP13.27□□□□□ -0.29
UPF1-203ENST00000594504 C8orf48Q96LL4 319 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 TPSD1Q9BZJ3 242 aa13.27□□□□□ -0.29
UPF1-203ENST00000594504 CHORDC1Q9UHD1 332 aaPredicted RBP13.27□□□□□ -0.29
UPF1-203ENST00000594504 PPP1R3GB7ZBB8 358 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 CETN3O15182 167 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 PHACTR2O75167 634 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 AKAP3O75969 853 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 NFATC1O95644 943 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 CYP17A1P05093 508 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 MBL2P11226 248 aaPredicted RBP13.26□□□□□ -0.29
UPF1-203ENST00000594504 CD44P16070 742 aaKnown RBP13.26□□□□□ -0.29
UPF1-203ENST00000594504 PSMC2P35998 433 aaKnown RBP13.26□□□□□ -0.29
UPF1-203ENST00000594504 MPLP40238 635 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 AP3M2P53677 418 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 NOP14P78316 857 aaKnown RBP13.26□□□□□ -0.29
UPF1-203ENST00000594504 CLDN10P78369 228 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 SLC7A9P82251 487 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 FKBP3Q00688 224 aaKnown RBP13.26□□□□□ -0.29
UPF1-203ENST00000594504 DHCR24Q15392 516 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 TDRD10Q5VZ19 366 aaKnown RBP13.26□□□□□ -0.29
UPF1-203ENST00000594504 IL31Q6EBC2 164 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 FOXR2Q6PJQ5 311 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 PAQR9Q6ZVX9 377 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 INTS8Q75QN2 995 aaKnown RBP13.26□□□□□ -0.29
UPF1-203ENST00000594504 SDK1Q7Z5N4 2213 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 C12orf40Q86WS4 652 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 TTC30AQ86WT1 665 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 FAM186BQ8IYM0 893 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 GPT2Q8TD30 523 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 EXOC4Q96A65 974 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 SDCBP2Q9H190 292 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 XYLT2Q9H1B5 865 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 SMYD3Q9H7B4 428 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 ZDHHC4Q9NPG8 344 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 CFAP97Q9P2B7 532 aa13.26□□□□□ -0.29
UPF1-203ENST00000594504 BICDL2A1A5D9 508 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 LRRIQ3A6PVS8 624 aaPredicted RBP13.25□□□□□ -0.29
UPF1-203ENST00000594504 TM4SF5O14894 197 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 CLSTN1O94985 981 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 APBB3O95704 486 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 OLFM2O95897 454 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 MBD3O95983 291 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 OAS1P00973 400 aaKnown RBP13.25□□□□□ -0.29
UPF1-203ENST00000594504 C4BPAP04003 597 aaKnown RBP13.25□□□□□ -0.29
UPF1-203ENST00000594504 FAM163BP0C2L3 166 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 KRT13P13646 458 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 HNRNPLP14866 589 aaKnown RBP eCLIP13.25□□□□□ -0.29
UPF1-203ENST00000594504 GBP1P32455 592 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 PMS1P54277 932 aaKnown RBP13.25□□□□□ -0.29
UPF1-203ENST00000594504 DLG4P78352 724 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 CREB5Q02930 508 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 ENPEPQ07075 957 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 ORC1Q13415 861 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 N4BP2L1Q5TBK1 243 aaPredicted RBP13.25□□□□□ -0.29
UPF1-203ENST00000594504 STPG1Q5TH74 334 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 ANKRD40Q6AI12 368 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 KLHL10Q6JEL2 608 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 RHBDF2Q6PJF5 856 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 TMEM92Q6UXU6 159 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 ZC3H3Q8IXZ2 948 aaKnown RBP13.25□□□□□ -0.29
UPF1-203ENST00000594504 NUP93Q8N1F7 819 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 B3GALNT2Q8NCR0 500 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 TSTD1Q8NFU3 115 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 SCAMP5Q8TAC9 235 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 WBP2Q969T9 261 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 ACDQ96AP0 544 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 CEP295NLQ96MC4 621 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 MED10Q9BTT4 135 aa13.25□□□□□ -0.29
UPF1-203ENST00000594504 EBF1Q9UH73 591 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms